Ruminococcus champanellensis: RUM_18370
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Entry
RUM_18370 CDS
T02600
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00550
Peptidoglycan biosynthesis
rch01100
Metabolic pathways
rch01502
Vancomycin resistance
rch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RUM_18370
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RUM_18370
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RUM_18370
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rch01002
]
RUM_18370
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rch01011
]
RUM_18370
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rch01504
]
RUM_18370
Enzymes [BR:
rch01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
RUM_18370
Peptidases and inhibitors [BR:
rch01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RUM_18370
Peptidoglycan biosynthesis and degradation proteins [BR:
rch01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RUM_18370
Antimicrobial resistance genes [BR:
rch01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RUM_18370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
CBL17890
UniProt:
D4LE45
LinkDB
All DBs
Position
1945719..1946711
Genome browser
AA seq
330 aa
AA seq
DB search
MNRHFDFGRLAVALALIILLIFGVDFIRRSLLQLFHKQPDIQLEGNNSSFLDTVDSVTDP
VQTGDATEPAGTDDSSSAGSYDTERYTTVSKPYTEVGAGPLILVNQEHPYTGSGSDLSSF
SGTKNDSFRLKNFGLMVNSDLLTPLNDMFAAFSQATGLKNVMLYSTHENYAGGMYDTDIP
ERKTGYCVDMSLLKDDGIGRFTGTDKYSWIVSNCAQYGFVQRYPADKKSKTGVEENTWHY
RFVGAPHAALMKQNNLCLEEYLEWIRDYTPSGNPAAITVNGTYYEVYYVPAVQGNTTEVP
VPKSDSYTVSGDNIGGFVVTVQATIGGSGN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacattttgatttcggacgactggcagtcgcactggctctgattattttattg
atttttggcgtggattttataagacgctccctgttgcagctgtttcacaagcagccggat
atccaactggaaggaaacaacagttcctttttggatacggtggattcggtgacggatccg
gttcagacaggagatgccacagagcctgccggtacggacgacagctcctccgcaggcagc
tatgatacagaacgatacaccacggtcagcaagccctatacagaagtgggtgccggaccg
ctgatcctggtgaatcaggagcatccctacaccggctccggcagtgatctgtcctccttc
agcggcacgaagaacgacagcttccggctgaaaaactttggtttgatggtaaacagcgat
ctgttgacaccgctgaacgatatgtttgccgcattcagccaggccaccggactgaaaaat
gtcatgctgtattcgacccatgaaaactatgccggcggcatgtatgatacggatattccg
gagcgaaagaccggctattgcgtggatatgtccctgctgaaggatgacggcatcggcagg
ttcaccggcacggacaagtatagctggatcgtttccaactgtgcccagtatggctttgta
cagcgttatcctgctgacaagaaatccaaaaccggagtggaggagaatacctggcattac
cgctttgtgggtgctccgcatgctgccttgatgaagcagaataacctttgcctggaggaa
tacctggaatggatccgggattataccccctccggcaatccggcggcgattacagtgaac
ggaacctattatgaggtttattatgtaccggcggtgcagggcaataccacagaggtgcct
gtgccgaaaagcgactcctacaccgtttccggggataatatcggcggctttgtggtaacg
gtacaggcgaccataggcggttccgggaactga
DBGET
integrated database retrieval system
