Riemerella columbina: NYR17_01550
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Entry
NYR17_01550 CDS
T09247
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rcl
Riemerella columbina
Pathway
rcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NYR17_01550 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcl03400
]
NYR17_01550 (nth)
Enzymes [BR:
rcl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NYR17_01550 (nth)
DNA repair and recombination proteins [BR:
rcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NYR17_01550 (nth)
Prokaryotic type
NYR17_01550 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
DUF3349
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WKS95449
LinkDB
All DBs
Position
complement(341148..341768)
Genome browser
AA seq
206 aa
AA seq
DB search
MTKKQKAEIIIRELERLYPETPIPLDHQDPYTLLVAVALSAQTTDKKVNEVTPQLFAVAD
TPFKMKDLEVAEIKELIKEIGLSNTKAKNLKAMAELLVERHNGVVPQTFEELEALPGVGH
KTASVVMSQAFGVPAFPVDTHIHRLMTQWKMTSGKNVVQTEKDAKKWFPKEKWNTLHLQI
IFYGREYSPARGNGDKDFLTKLLLSS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaaacaaaaagctgaaattatcatccgagaattggagcgcctctaccctgaa
acgcctatcccactggatcatcaagatccttatactctattagttgccgttgcactttcg
gcacagactacggataaaaaagtgaacgaagtcacaccccaactcttcgccgtggcagat
acgccttttaaaatgaaggatttagaggtggcagaaattaaggaactcatcaaagaaata
gggctctctaacaccaaagccaaaaacctaaaagcgatggcagagctcttagtagagcgg
cataatggcgtggttccacagacttttgaggagctggaagccctccctggcgtggggcac
aaaacggcttccgtggtgatgagccaagctttcggcgtgcctgcatttcccgtggatacc
cacatccaccgactgatgacccaatggaaaatgacttctggaaaaaatgtggtacaaacg
gaaaaagatgctaaaaagtggttccccaaagagaaatggaataccctccaccttcaaatc
attttctacggcagagaatattcccctgccagaggcaacggcgacaaagatttcctaacg
aaactattgctctcctcttag
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