Riemerella columbina: NYR17_02075
Help
Entry
NYR17_02075 CDS
T09247
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rcl
Riemerella columbina
Pathway
rcl01501
beta-Lactam resistance
rcl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NYR17_02075
01503 Cationic antimicrobial peptide (CAMP) resistance
NYR17_02075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcl03036
]
NYR17_02075
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcl02000
]
NYR17_02075
01504 Antimicrobial resistance genes [BR:
rcl01504
]
NYR17_02075
Chromosome and associated proteins [BR:
rcl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NYR17_02075
Transporters [BR:
rcl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NYR17_02075
Antimicrobial resistance genes [BR:
rcl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NYR17_02075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
PsbP_2
OEP
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
WKS95548
LinkDB
All DBs
Position
complement(441885..442949)
Genome browser
AA seq
354 aa
AA seq
DB search
MNKKTLLSIIAVVAVAVGFYFILQRNKANNQEKVDIVAQSNSGNGAVTVRAVPVKKEYIG
GDFSVNGTFLPNKKADIAAEMGGQLVALYVKEGSYVRAGQVIAKLKGDKLNVNASNAQAN
LDQALSALSRYEAAYKTGGVTALQLDQARLQVKNARAQVQSANLQSGDTNVVSKISGIVN
KKMVELGSVIGAGTPIVEVVDISALKLKVEVDEALVTQLAVGNTVQIKPSVSDATIDGKI
TFIAPASNGALKFPVEITINNAGSHLKAGMYATAIFKTSGAGDVLTLPREAFVGGVSDNL
VFVVKDNVAHLTKIQSGANYGDKVVVTGGLNAGDMVVTSGQINLSDKTKVKVLK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaaactttattaagcataatcgcggtagtggctgtagccgtaggtttctac
tttattttacaaagaaacaaagccaataaccaagagaaggtggacattgtagcccaatcc
aatagcggcaatggcgccgtaaccgtgagagctgtacccgtgaagaaagagtacatcggc
ggagattttagtgtgaacgggactttccttccgaataaaaaagccgacatcgctgcggaa
atgggcggtcagctggtggcgctctatgtgaaagaaggcagctatgtgcgtgcaggacaa
gtgattgccaaactaaaaggcgacaaactcaatgtgaatgccagcaatgcgcaagccaac
ttagaccaagccctctctgctcttagccgctacgaagccgcttataaaacaggtggggtt
actgctttgcaattagaccaagcacgcctacaagtgaaaaacgcccgtgcccaagtgcaa
tcggcaaatttacaatctggcgataccaatgtggtgtctaaaatcagtgggattgtcaac
aaaaaaatggtggaactcgggagcgtgattggcgctggaactccgattgtggaagtggtg
gacatctctgcccttaaactcaaagtagaggtagatgaagccttagtaacacaacttgcc
gtgggcaacaccgtgcagattaaaccaagcgtgtctgatgctactattgatgggaaaatc
actttcatcgctcctgcctctaatggtgcgttgaaattcccagtagaaattaccattaac
aatgctggcagccacctcaaagctggaatgtacgccacagccatcttcaaaaccagtggt
gctggcgatgtgctaactttaccgagagaagcctttgtaggtggggttagcgataattta
gtctttgtagtgaaagacaatgtagcccacctgaccaaaatccaaagtggtgccaactat
ggcgacaaagtggtagtaactggcggcctcaacgctggcgatatggtggtaaccagtgga
caaatcaacctttctgataaaaccaaagtaaaagtgttgaaataa
DBGET
integrated database retrieval system
