Riemerella columbina: NYR17_06225
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Entry
NYR17_06225 CDS
T09247
Name
(GenBank) 2-oxo acid dehydrogenase subunit E2
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
rcl
Riemerella columbina
Pathway
rcl00020
Citrate cycle (TCA cycle)
rcl00310
Lysine degradation
rcl00380
Tryptophan metabolism
rcl00785
Lipoic acid metabolism
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
rcl01210
2-Oxocarboxylic acid metabolism
Module
rcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rcl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NYR17_06225
09105 Amino acid metabolism
00310 Lysine degradation
NYR17_06225
00380 Tryptophan metabolism
NYR17_06225
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NYR17_06225
Enzymes [BR:
rcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
NYR17_06225
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Paralog
Gene cluster
GFIT
Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
GCV_H
OB_HELZ2
Motif
Other DBs
NCBI-ProteinID:
WKS94533
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Position
1313517..1314824
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AA seq
435 aa
AA seq
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MAEYKLLLPSMGEGVMEATIISWLYNEGDSVSEDDSVVEIATDKVDSDVPTPVSGKIVKI
LKQKDEIAQVGEPIAILETEAEGTETATPEATSTPIEKAPEPTPEPEVISTLEEPLKVAQ
PEFSGDLYLSPLVKSIAQEENISEEELKNIHGTGLEGRITKEDILKFVENRTSTKPTSAP
KVETPKPATTAPATPISITDGDEIIQMDRVRKIIADSMVRSKQTAPHVSSFIETDVTNVV
KWRNKNKNSFQQREGEKLTFMPIFVRAIVKAIQDYPLINVSVDGDKIIKKKNINIGMATA
MPDGNLIVPVIKNADQLSLSGLAKAINDLAYRARNKKLRPEDTQGATYTISNIGTFGNLM
GTPIIPLPQVAILAVGAIVKKPAVLETPDGDVIAIRQKMFMSHSYDHRVVDGSLGGMFLK
AVNDYLENWDLDTDI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatataaattattacttccgtctatgggagaaggcgttatggaagcgacgatt
atctcttggctctataacgaaggcgatagcgtatcagaagatgatagcgtggtagaaata
gcaaccgacaaagtggattctgatgtgcccacgcctgtttctgggaaaatcgtaaaaatc
cttaagcaaaaagatgaaattgcccaagtgggagagcccatcgcgatattagaaaccgaa
gctgaaggtactgaaaccgctacccctgaggcaacatccacaccgatagaaaaagcacca
gaacctacgccagagccagaagtcatcagtactttagaagaaccactaaaagtggctcaa
cctgagttttctggcgatttatacctctcgccgttggttaaatccattgctcaagaggaa
aacatttctgaagaagagttaaaaaacatccacggaacaggcttagaagggcgaattact
aaagaagatattttaaaatttgtagaaaatcggacaagtacaaaaccgacttctgcaccg
aaagtagaaacgccaaaaccagccaccacagcacctgcaacgccaatcagcattaccgat
ggcgatgaaattatccaaatggatcgggtgagaaaaatcatcgcagactctatggttagg
agcaagcaaacggcgccgcatgtgagttctttcatagaaaccgatgttaccaatgtggtt
aaatggagaaataaaaacaaaaacagtttccaacagcgcgaaggcgaaaaactgactttt
atgcctattttcgtgcgtgctatcgtgaaggctattcaagattatccgttaatcaatgtc
tctgtagatggcgataaaatcatcaaaaagaaaaatatcaacatcggaatggcaactgca
atgcctgatggcaatcttattgtccctgtgattaaaaatgcagatcaactttcgctcagc
ggattggctaaagccatcaatgatttggcttaccgtgccagaaataaaaaattaagaccc
gaagacacccaaggggctacttacaccatttctaacatcggaacttttggaaatttaatg
gggacgcctattattccactgccgcaggtggctattctggctgtgggcgctattgtgaag
aagcctgccgttttagaaacgcctgatggcgatgtgattgcgattagacaaaaaatgttt
atgagccactcttatgatcaccgtgtggtagatggttctttgggcggaatgttcctaaaa
gccgttaacgattatcttgaaaattgggacttagacaccgatatttaa
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