Rosa chinensis (China rose): 112164441
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Entry
112164441 CDS
T06020
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112164441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112164441
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112164441
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Motif
Other DBs
NCBI-GeneID:
112164441
NCBI-ProteinID:
XP_024156400
LinkDB
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Position
5:88991867..88992952
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AA seq
272 aa
AA seq
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MTTLSPPPPSFNPLKLAPKSLIPPKPASASEPDPSVTETPTPGPNPTQSPTTLLHLAFNQ
DHTCFSAATDFGFRVYTCDPFRHFHSDPSGLRSGVGFVQMLFHCHYFPVFGSGPDPDCVP
PDSKPLIDDFSLTLNVGDRCLLVGSNGADKTMILRILGGKHMVDPSMVRVLGRSAFHDTA
LTGFGDLSYLGGEWRRDVAFVGFDVPIQMDVWADKLIKGELHIHLGYVLLLDEITVDLDV
LVRADLLQFLRKECDERGAMIVSQAPNCRERV
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctctctcctcctcctccgagtttcaatcctctaaaactcgctcccaaatcc
ctcattccacccaaaccggcctctgcctccgaacccgacccgtccgttacagaaacccca
accccaggtccaaacccgacacaatcccccaccaccctcctccacctcgctttcaaccaa
gaccacacctgcttctccgccgccaccgacttcggcttccgcgtctacacctgcgacccc
ttccgccacttccacagcgacccctccggtctacgcagcggcgttggattcgtccagatg
ctcttccactgccactacttccccgtcttcggcagcggacccgacccggactgtgttccg
cccgactccaagcctctaatcgacgacttctccctcaccctcaacgtcggggatcgatgc
ctcctcgttggatccaacggcgccgacaaaaccatgatcctcaggattctcggaggcaag
cacatggtcgaccccagcatggtccgggttctgggtcgctcggctttccacgacaccgct
ctcaccggcttcggcgacctgtcgtacctaggcggagagtggcggcgtgacgtggcgttt
gttggtttcgacgttccgatacagatggatgtttgggctgataaattgatcaaaggagag
ttgcatattcatctcggttatgtgcttctacttgatgagatcacggtggaccttgatgtg
ctagtgagggcggacctgctccagttcttgaggaaggaatgtgacgagcgaggtgctatg
atcgtttctcaagccccaaattgcagagagagagtctga
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