Rosa chinensis (China rose): 112166304
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Entry
112166304 CDS
T06020
Name
(RefSeq) uncharacterized protein At4g19900
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rcn00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
112166304
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
112166304
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcn01003
]
112166304
Enzymes [BR:
rcn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
112166304
Glycosyltransferases [BR:
rcn01003
]
Glycan extension
P blood group
112166304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
112166304
NCBI-ProteinID:
XP_024158876
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All DBs
Position
5:complement(4960064..4961899)
Genome browser
AA seq
475 aa
AA seq
DB search
MLDSEKTPKLLSPLIVFITQLQDLRRSTLSVLLSLPSSLLALFLILLLVYNSFYVFCITL
PFPAKPPPEPANFSPPSLAGKPFPKWAPPFRSSSSSKVQSSSVMYVVKEENAPMFLKNTT
HLASLQNPTNSMIPILKYKFQRSRKFRKHKRKLKAIPIETKWPPSQSQFPTRMREFLSGN
SSGSSCKIRFFMTWISSKTLGNRELLAVESVFKSHPNACLVIVSNSLDSYKGLEILKPFS
DLGFRVMAIAPDFDYLFHNTPAEAWFFGLRKGNVRPGGVSIGQNLSNVLRLALLYKYGGI
YLDTDVIVLRSLSKMKNVIGAQTIDLKTGNWSRLNNAVLVFDKNHPLLFKFIQEFALTFD
GNKWGHNGPYLVSRVVSRISEKPNPGFNFTVVTPSAFYPVNWSRIRSIFGGPKDEVYSKW
LLTKLKHIRSHSFALHLWNSQSRRLKVQKGSIIDHIMSDFTVCYNSSSATSSLSL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactctgaaaaaacccccaaactgctcagtcccctcattgtcttcatcacccaa
ttgcaagacttgagaagatcaaccctctctgttcttctaagcctacccagttctcttctt
gctctgtttctcattctccttttggtctacaacagcttctatgtcttctgtataactctc
ccttttcccgccaaaccccctccggaacccgccaatttctcgccgccaagtctcgccgga
aaacccttcccaaaatgggctcctccctttcgctcttcttcttcatcaaaggttcagtct
tcttctgttatgtatgtggtgaaagaagaaaacgcacccatgttcttgaagaacacaacc
catttggcctctctgcaaaacccaacaaactcaatgatacccattttgaaatataagttt
cagaggtcaagaaagttcagaaaacacaagcgcaagctcaaagccatacccattgagacg
aagtggcctccgtctcagagtcaattcccaacaagaatgagagagttcttgagtggaaac
tcttctggttcttcttgcaaaatcaggtttttcatgacttggatttcatccaagactctt
ggaaatagggaattgttagctgtggagagtgtgttcaaatcccacccaaatgcttgtttg
gtcatagtctcaaattctctggattcctacaagggacttgaaatcctgaagccgttttcg
gatttgggctttcgagtaatggcaattgctcctgattttgattacttgttccacaatact
cctgctgaggcttggttttttgggttgagaaaaggcaatgtgagacctggtggagtctca
attggtcagaacctctccaatgtgcttaggcttgctttgttgtacaagtatggtgggatt
tacttggacacagatgttatagtgttaaggagtttgtcaaagatgaaaaatgtgattggg
gctcagacaattgacctcaaaaccggtaattggagccgattgaacaatgctgtgttggtg
ttcgacaagaatcatccattactcttcaagttcattcaggaatttgctctgacttttgat
ggtaacaaatggggtcacaatggaccttacttggtctcaagagtggtttcaaggatcagt
gaaaaaccaaaccctggttttaactttactgtggtaactccctcggcattttatccggtg
aattggagccgtattcggagtatttttggtggtccgaaagatgaggtatactcgaaatgg
ctgcttacaaagctgaagcatattagatctcatagctttgcattgcacttgtggaatagt
cagagtagaagactgaaggttcagaagggaagcattattgatcatataatgtcagatttt
accgtctgttacaattcttcttctgcaacttcaagcttgtcattatag
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