Rosa chinensis (China rose): 112169264
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Entry
112169264 CDS
T06020
Name
(RefSeq) (-)-kolavenyl diphosphate synthase TPS28, chloroplastic isoform X1
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00904
Diterpenoid biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
112169264
Enzymes [BR:
rcn01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
112169264
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Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Terpene_synth_C
DUF5891
Motif
Other DBs
NCBI-GeneID:
112169264
NCBI-ProteinID:
XP_024162045
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Position
6:complement(54108131..54113442)
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AA seq
825 aa
AA seq
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MSSHSTHHLSLSLPPSLSLSSSPFSNHNQPKHLPGGLWLFGFKDKRVLPSICNAVSKPRT
KDYADVLQPVIKWRKNHTIVGDDTQEDEEAPPTKDDDSATTEIIKEHVDSIKSMLSSMED
GEISVSAYDTAWVALIENVNETDSPQFPSSLEWIANNQLEDGSWGYEDIYSAHDRIISTL
ACVVALKSWNLHPDKCDKGMKFFKENLNKLEEENIEHMPIGFEVAFPSVLEIARSLNLEV
PDDSPVLHKIYACRNLKLTKIPKDILHKVATTLLHSVEGMAGVDWEKLLKLQSQDGSFLF
SPASTAYAAQQTKDGKCMSYLSRAVRKFNGGVPNVYPVDLFEHMWAVDRLQRLGLCRYFE
PEIKECMNYVAKYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHRVSADVFKHFKKGDE
FFCFAGQSNQAVTGMYNLYRASQVALPGEKILYEAKEFSTKFLREKQASNELLDKWIIMK
DLPGEVGYALDVPWYASLPRLETKFYIEQYGGEDDVWIGKTLYSMPYVNNNVYLELAKLD
FNNCQALHLSEWDNLQKWYGEWKIGGYGLSRKSLLMAYFVAAASIFEPERANERLAWAKT
ACLVDTIEAYFKRETSREDKKAFVDEFKNLSDMREYEVARRSNRNRTAGQGIVGALLAML
SQLSLGTMVLHGQDITQSLRQSWEKWLLKWLEIGGRHQDEAELLVETINQTAGLSLTDGL
LSNNPEHELLFSLTNKVCNQLRFCQNQKHQMNNNGSCGTKMNMTAKAIESDMQQLVELVL
KSSDGIESLIKQSFFSVARSFYYSTYCDPKIISHHIDKVLFERAI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcattccacccaccacctctctctctctctcccaccttctctttcgctctct
tcatctcctttctccaaccacaatcaacctaaacatttaccgggtggtctttggttgttt
gggtttaaagacaaaagggttcttccctcaatctgcaatgcggtttccaaacctcgcacc
aaagattatgcagacgtgttgcaaccagtgataaagtggcgtaagaatcatacgatcgtg
ggggatgacacacaagaagatgaagaggctcctcctaccaaggacgacgactctgcaaca
accgagatcatcaaggaacatgtggactccatcaagtccatgctgtcttctatggaggat
ggggagatcagcgtatcagcgtacgacaccgcctgggttgctttgattgaaaatgtaaat
gaaactgattcacctcaattcccttccagcctcgaatggattgccaacaaccaactcgaa
gatggttcttggggctacgaggacatctactccgcccacgatcggatcatcagcaccctc
gcctgcgtcgtcgctttgaagtcgtggaatctccaccccgacaaatgcgacaaaggaatg
aagtttttcaaggaaaacctaaacaagctggaagaagagaatatcgaacacatgcctata
gggttcgaagttgcgtttccctctgttctggaaatagctcggagcttaaaccttgaagtg
cctgatgactctcctgtgttgcataagatctatgcctgcagaaacttaaaactaaccaag
atacccaaggacatactgcacaaagtggccacaacgcttcttcatagcgtggaagggatg
gcaggtgtcgactgggaaaagcttctgaaactccagtcccaagacggctcgtttttgttc
tctccggcgtccactgcctacgcggctcagcagaccaaggacggaaaatgcatgtcgtat
ctgtccagagcagtccgcaagttcaatggaggagtccctaatgtttacccagtcgacttg
ttcgaacacatgtgggctgtggatcggttgcagaggttaggattgtgcagatacttcgag
ccggagattaaggagtgtatgaactacgttgccaagtactggactgagaaagggatttgc
tgggcgagaaactcagaggttcaagacatcgatgacacagcgatggggttcagactgctc
cggttgcatgggcacagagtgtcagccgatgtgtttaagcattttaagaaaggggacgag
tttttctgctttgcgggacaatcgaaccaggctgtgaccggaatgtacaacttgtatagg
gcaagtcaggtggcgttaccgggagagaagatactctatgaagccaaggagttctcgaca
aagttccttagggagaagcaagcttcaaacgagcttctagacaagtggatcataatgaag
gacttgcccggagaggtgggatatgcccttgatgttccatggtatgccagcttacctcga
ctagagactaaattctatatcgaacaatatggtggtgaagatgacgtatggattggcaag
actctctacagtatgccctacgttaacaataatgtgtatcttgagctggcaaagctagac
ttcaacaattgccaagcactacatctcagtgaatgggacaaccttcaaaagtggtacgga
gaatggaaaattggaggctatggactaagcagaaaaagtctcctcatggcttattttgtt
gccgcagcaagtatttttgaacctgaaagagcaaatgagcgactcgcatgggctaagacg
gcctgcttagttgacacgattgaggcttattttaagagagaaacttctcgtgaagataag
aaggcatttgttgatgagttcaaaaacctttcagatatgcgagagtatgaagttgcaagg
aggtcgaataggaacaggactgccgggcaaggaattgttggggctttgttggcgatgcta
agccaactctcattgggcacaatggtgctacatggccaagacattacccaatctctacgt
caatcttgggagaagtggctactgaagtggctagagatagggggaaggcatcaagatgaa
gctgagctactagtagaaacgataaatcaaaccgctggcctttcactaactgatgggttg
ttgtccaataatccagaacatgagctgctttttagcctgactaacaaagtttgcaatcaa
cttcgtttttgccaaaaccaaaagcaccagatgaacaataatggcagctgcggaacaaaa
atgaacatgactgccaaagcaatagaatcagacatgcagcagcttgtggaattggtgcta
aaatcttcggatggcatagaatccttaatcaagcaaagctttttctcagtagcaaggagc
ttttattattcgacctactgtgaccctaaaattattagccaccacattgacaaagtactc
ttcgagagagcaatttga
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