Rosa chinensis (China rose): 112170995
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Entry
112170995 CDS
T06020
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112170995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112170995
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112170995
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
112170995
NCBI-ProteinID:
XP_024164014
LinkDB
All DBs
Position
6:complement(48829267..48833944)
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AA seq
510 aa
AA seq
DB search
MNYRVPEFEMEGDYSLPASSPRSRKSTMPEDEVMELLWQNGQVVMQSQTQRSGHKKSKYD
AVIPEHTRPPAAQPPPVNQPQNPQLFMQEDEMAAWLQCPLGDDDPFCAELLYTDSRNAQS
NNTAANLPPISPPPPRLPIHPPPPAPRRTELPNFLHFSRMTNNNNNKSRYESEAVGPSGS
KSVDSRFDASSNNASGGGRGLAATRTMSFGAAASAGKDAVTCETSLTSSTGDSSASGSLS
AEQMSIQKPPPPPLPVEDRKRKERVADDAECQSEDVEFESGSGKKQTRGSSSTKRSRAAE
VHNLSERRRRDRINEKMRSLQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMV
PMMFPGVQQYMPMGMGMGMGMGMGMGMEMGMGMSRPMMPFPNVLAGSTMPTAPATAHMGP
RFPLPPFRMQTMLPNDPSRVQATNQSEHMLNSLGTQNQNQSRVTNFADPYQHYFTPQQMR
MQLQQNQAMPQPSSSKPSSSMGPENQESHQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccgcgtccccgaattcgaaatggagggagattactcacttccggcatcttct
cctcgctctagaaaatccaccatgccagaagatgaggtcatggaactgctatggcagaac
ggacaggtggtgatgcagagccaaacccagaggtcgggacataagaagtccaaatacgac
gctgttattcccgaacataccagacctccggcagcgcaaccgccgccggtgaatcaacct
caaaacccgcagctgtttatgcaggaagacgaaatggccgcctggctacagtgccctctc
ggcgacgacgatcctttctgcgccgaacttctttataccgattccagaaacgctcaatcc
aacaacaccgccgccaaccttccaccgatttctccgcctccccctcggctgccgatccat
cctccgccgccggcgccgaggaggaccgagctcccgaacttcctccacttctccaggatg
accaacaacaacaacaacaagtctcggtatgaatccgaggcggtggggccgtcggggtcg
aagagcgtggattcgaggttcgacgcctccagcaacaatgctagcggcggcggaagagga
cttgccgccacccgtacgatgtcgttcggtgccgccgcctcagccgggaaagacgccgtg
acgtgcgagacgtcgctgacgtcgtctaccggagactccagcgcgagcggcagcctaagc
gccgagcagatgtcgattcagaagccgccgcctccgccgctgccggtggaggatcggaag
cgcaaagagagagtggccgacgacgcggagtgtcagagcgaggatgtggagtttgaatct
gggagtggaaagaagcagacccggggatcgagttctactaagagatcacgagctgcggag
gtccacaatctctccgaaaggagacgtcgagataggatcaatgagaagatgaggtctttg
caagaattaatacctcgttgcaataagtcggacaaagcgtcaatgctggatgaagcgatt
gagtatttgaaatcacttcagttgcaagtacagatgatgtccatgggatgcggcatggtc
cctatgatgtttcctggtgttcagcagtatatgccgatgggaatgggaatgggaatggga
atgggcatgggcatgggaatggaaatgggaatgggaatgagtcggcctatgatgccattt
ccgaatgtgttagctggttccaccatgccaacagcacctgcaacagctcatatgggaccg
aggttccctttgccaccatttcgaatgcagactatgcttcccaatgatcctagcagagtc
caagcaacaaatcagtctgaacatatgttaaactcgcttgggacacaaaatcagaaccaa
tcacgagtaacaaattttgcggatccttaccagcactacttcactccccagcaaatgcgg
atgcaactacagcagaatcaagccatgcctcagccaagttctagcaagccgagttccagt
atgggacctgaaaatcaagagagtcatcaatga
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