Rosa chinensis (China rose): 112176365
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Entry
112176365 CDS
T06020
Name
(RefSeq) transcription factor PIF7 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112176365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112176365
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112176365
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
112176365
NCBI-ProteinID:
XP_024170007
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Position
7:complement(3628296..3630887)
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AA seq
384 aa
AA seq
DB search
MQQQHQNNPNITHLVPMSNYDVAELKLENGHLAIHGLGGIVPTALEKATWSNKACDTLES
IVHQATCHKVPKTNLSSMVASSGGTWTEDSGQQPLENSWIRNCTRSDSDYHGKNVSSTST
TSNVHEEQTEYQRDNDTTLNTWVSFESARSKSNDDDSTCHEGLENQDKGRKTAKGNESSR
SRSRSRRVAAIHNQSERKRRDRINQKMKALQRLVPNADKTDKASMLDEVIKYLEQLQAQV
QMMNSMRNNMHPHMNMMMPLGMQQQQHLHQMSVLARMGMTPVVPGSLGMGMLDVSNMARI
APHQSLQQPLIHPTPASFLPPFMVPQLMPPKPDPATSANFADPYHALLAQQQSMNMDLFN
RMAALYGQQVNHQTAASSPSQSNN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagcatcagaacaaccccaacatcactcatctagtccccatgtctaactat
gacgttgctgagctaaagttggaaaatggtcatttggcaattcatgggcttggtgggatt
gttcccactgctctggaaaaggccacctggagcaataaggcatgtgacacactggaatca
atagtccatcaagctacatgccacaaagtacctaaaacaaatttaagctcaatggttgca
tcctctggtggaacatggactgaagattccggccagcagcctttggaaaacagttggatc
aggaactgtacccgatcggattccgactatcatggaaagaatgttagtagtactagtact
actagcaatgttcatgaagaacagaccgagtaccagagggacaatgatacaactctaaac
acatgggtttcttttgaatcggctaggagcaaaagcaatgacgacgattccacttgtcac
gagggattggaaaaccaagacaaaggacgaaagaccgcaaagggcaatgaatcaagccgt
tcacgatcacgatcacggcgagttgctgccatccataatcagtcagagaggaaacgaaga
gatcggatcaatcagaaaatgaaagctctacagaggttggtgccaaatgccgataagact
gacaaagcttcaatgctcgacgaggtgataaaatacttggaacagcttcaagcacaagtt
caaatgatgaatagcatgaggaataatatgcatccccatatgaatatgatgatgccttta
ggaatgcagcagcagcaacatcttcatcaaatgtcagtcctagcgcgcatgggaatgact
cctgttgtacctggctcgctaggaatgggaatgctcgacgtaagcaacatggcaagaatt
gctcctcatcaatctctacagcagccgctcattcatcctactcctgcatcatttcttcca
ccctttatggtgccccaactgatgccgccaaagcctgaccctgccactagtgctaatttt
gctgatccatatcatgccctcctagcacaacagcaatcaatgaatatggacctgttcaac
aggatggcagcactgtacggtcaacaagtcaatcatcagacggcagcaagcagcccatca
cagtcaaacaattaa
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