KEGG   Rosa chinensis (China rose): 112176922
Entry
112176922         CDS       T06020                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112176922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112176922
Spliceosome [BR:rcn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112176922
 Complex B
    112176922
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    112176922
SSDB
Motif
Pfam: SMN_Tudor Agenet TUDOR SUS_EPBD
Other DBs
NCBI-GeneID: 112176922
NCBI-ProteinID: XP_024170830
LinkDB
Position
7:complement(38248987..38254852)
AA seq 304 aa
MQGEGGEELTIEELASNLSTYKEQLQQVKEVLAHDPGNSEYADVERELHEVIAMTEELLA
TAKQNQNFGLEIGTRGSASPSFPQSQKSENDAGSISDYHNNFAPGTKVQAVWSEDGEWYE
ATIDSLTPNGYYVTYDGWGNKEEVDPANVRPIQEGAVNALLEAEKVAEATKQAIKRKIAQ
AASVDFQSRSLPAKLRIEPDDPEDVKIAKRKKIHAFKSKMRMEQLEVTQNKRQNAWQQFQ
TTKGKTKKSGYLSGRKRESIFKSPDDPFGKVGVTGSGKGLTDFQKREKHLHLKGGAAEND
DEAP
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcaaggggaaggaggagaagagctaaccatagaggagctcgcctccaatctctccaca
tacaaagagcagcttcaacaggtcaaggaggttttagcccatgaccctggaaactccgag
tatgctgatgtggaaagagagctccatgaggtaatagccatgacagaagaactacttgca
actgccaagcaaaatcagaattttggattagaaatcggaacaaggggtagtgcatctcct
agttttccccagtctcagaagagtgaaaatgatgcagggagcatttctgattatcataac
aactttgctcctggtacaaaagttcaagctgtttggagtgaagatggggagtggtatgaa
gcaacaattgattctcttactccaaatgggtattatgttacatatgatggctgggggaat
aaagaagaggtggatccagccaatgtaaggccaattcaagaaggggctgtcaatgcattg
ttggaagcggaaaaagttgctgaagctacaaaacaagcaatcaaaaggaaaattgcacaa
gctgcttctgttgacttccaatcacgaagcctaccggcaaagcttcgtatagaaccggat
gatcctgaggatgtgaaaattgccaaacgcaagaagatacatgcttttaagtcaaaaatg
aggatggagcagttggaagtcactcagaacaagcgtcaaaatgcttggcagcagttccaa
actaccaaaggcaagactaagaagagtggttatttatctggacgcaagcgggagagcatc
ttcaagtctcctgacgatccttttggaaaggttggggtgactggcagtgggaagggtttg
acagactttcaaaagagggaaaagcatttgcatctcaaagggggagcagctgagaatgat
gatgaggctccttag

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