Rosa chinensis (China rose): 112183674
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Entry
112183674 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112183674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112183674
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112183674
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ORC-CDC6-like
AAA_25
Zeta_toxin
AAA_15
Motif
Other DBs
NCBI-GeneID:
112183674
NCBI-ProteinID:
XP_024177800
LinkDB
All DBs
Position
2:10398705..10399573
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AA seq
250 aa
AA seq
DB search
MLFHCHYFAVFGGGPDPFCPPNKVISTTIASPAASTSSCSGPRSSRSGSAATASSSDCVP
PDAKPLIDDFSLTLNVGDRCLLVGSNGAGKTMILRILGGKHMVDPSMVRVLGRSAFHDTA
LTGFGDLSYLGGEWRRDVAFAGFDVPIKMDVWADKLINGVAGIDPQRRADLIKVLDIDLS
WRLHIHLGYVIFIFGHXRNVCEXIXVLSLDEITVDLDVLARADLLQFLRKECEERGAMFV
SQAPNWRERV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgctcttccactgccactacttcgccgtcttcggcggcggacctgacccgttctgcccg
cccaacaaggtcatatctacaacgatcgctagtcccgctgcgtcaacgagctcttgttcc
ggtccgaggtcaagtcgatcaggctccgccgcgactgcatcgtcatcggactgtgttccg
cccgacgccaagcctctaattgacgacttctccctcaccctcaacgtcggcgaccgatgc
ctcctcgttggatccaacggcgccggcaaaaccatgatcctcaggattctcggaggcaag
cacatggtcgaccccagcatggtccgggttctgggtcgctcggctttccacgacaccgct
ctcaccggcttcggcgacctgtcgtacctaggtggagagtggcggcgtgacgtggcgttt
gctggtttcgacgttccgataaagatggatgtttgggctgataaattgatcaacggggtg
gctgggattgacccacaaaggagagctgatctgatcaaggtgttggatattgatctttca
tggaggttgcatattcatctcggttatgtaattttcatttttggacattgacgaaatgtg
tgtgaatgaatttaggtgctttcgcttgatgagatcacggtggaccttgatgtgctagcg
agggcggacctgctccagttcttgaggaaggaatgtgaggagcgaggtgctatgttcgtt
tctcaagccccaaattggagagagagagtctga
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