Rosa chinensis (China rose): 112185830
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Entry
112185830 CDS
T06020
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112185830
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
112185830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
DEAD
zf-C3HC4_3
zf-RING_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112185830
NCBI-ProteinID:
XP_024179920
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All DBs
Position
2:complement(75083865..75089823)
Genome browser
AA seq
895 aa
AA seq
DB search
MELRSRKRLSGADSDGIEQREEDGNSESSGSSDEEIYLPISLDSSSASDSEGEDNQQNEE
VTINLNDRPKGKLKQPLRKKGKVEQKKKREQPSSEEEVVDYGSFDELQLTPQKAVEIDFL
GLTRRIKKKKSRSGGRKPILMWNVWEEEHDKWIDENSSEDFDLNIQNNVVNEVAETPSDL
IMPLLRYQKEWLAWALRQEESETKGGILADEMGMGKTIQAIALVLAKREINWTFYEPGSS
TGLPHIKGTLVVCPVVAVSQWVSEIERFTSKGSTKILVYHGANREKSSKQFLEYDFVITT
YSTVEADYRKHVMPPKEKCPYCGKLFYETKMSIHLKYFCGPNAIRTEKQSKQQRKKHLPS
KKTCEPSKEKISGSSGTKKGARRKGSKLQKDDDMDSEDVVRDMNKKNSVLHAVKWNRIIL
DEAHYIKSRRCNTAKAVLALESTYKWALSGTPLQNRVGELYSLVRFLQLVPYSYYLCKDC
DCRTLDHSSTPQCSNCPHSSVRHFCWWNKNVATPIQLFGNSYNGKRAMILLKHKILKNIV
LRRTKKGRAADLALPPRIVSLRKDTLDIKEQDYYESLYTDSQALFNTYVDAGTLMNNYAH
IFDLLTRLRQAVDHPYLVVYSATAALRNGNKANIDNTEKVCGICHDPAEDQVVTACEHVF
CKACLIDFSASLGQVSCPTCSKLLTVDLTTSVGAGNQTTKTTIKGFRSSSILNRIQLENF
QTSTKIEALKEEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQKSGVNCVQLVGSMTMSA
RDTAIKRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQ
YKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSTEALGKLTEADLKFLFVT
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgttctcgtaaaaggctctccggcgccgattccgatgggattgagcagcgt
gaggaggatgggaatagcgagagcagtgggagctctgatgaggaaatctacttgcccatt
tctttggattcgtcttcggcgtctgatagtgaaggtgaagataaccaacagaatgaggag
gtgactattaacttaaatgatagaccaaagggcaaattgaagcagcctctgcgaaaaaag
gggaaggtcgagcaaaagaagaaaagagaacaaccaagttcggaagaggaagtagtggat
tatggcagttttgatgaattacaattgactccacaaaaagcagttgaaatcgactttctt
ggcttgacaaggagaatcaagaaaaagaagtcaagatctggtgggcgaaagccaattcta
atgtggaatgtctgggaagaggagcatgataaatggattgatgagaattcatcagaagat
tttgatctcaatattcagaataatgtggtaaatgaagttgctgagacaccgtctgatttg
attatgcctttgctgaggtatcagaaggagtggttggcctgggctctgagacaggaagag
tctgaaactaaaggaggaatccttgctgatgagatgggaatggggaagactatacaagca
attgcacttgtacttgctaaacgggagatcaactggacattttatgaaccaggatcctct
acaggcttgcctcacattaaaggaacccttgtagtttgtcctgtggttgctgtaagccag
tgggtaagtgagatagagcgctttacttcaaaaggaagtacaaagatcctggtgtatcat
ggagccaatagagagaagagttccaaacagttcttggagtatgattttgtcattacaacg
tactccactgttgaagctgattataggaagcatgtgatgcctcccaaagaaaagtgccca
tattgtgggaagttgttttatgagacaaaaatgtctatccacttgaaatacttttgtggg
cctaatgctatcagaactgagaagcagtctaagcaacaaaggaaaaagcatctgccatca
aagaagacatgtgagccttctaaagaaaagatcagtggaagttcgggcacgaagaaagga
gctcgcagaaaaggatcaaagctgcagaaagatgatgatatggattcagaagatgttgta
cgggacatgaacaaaaagaattcagttttgcatgctgtgaagtggaaccggatcattttg
gatgaggcacattatataaaatctaggcgttgcaatactgcaaaagctgttcttgcttta
gagtctacatataaatgggctctaagcggcacgcccctgcagaatcgtgttggagaactt
tactcattggtccgcttcttgcaattagtcccatactcatattacttgtgtaaggactgt
gactgcagaactcttgatcatagttccacaccacaatgttcgaattgccctcatagttct
gttagacatttttgttggtggaataaaaatgtggccacaccaatacaattatttggaaat
tcatataatggaaaaagagccatgatattgctaaaacacaagatcttaaagaacatagtg
ctgcgacgaactaaaaagggaagggctgctgaccttgcacttcctcctcgaattgtttca
ttgaggaaggataccttggatatcaaagaacaagattactatgagtcattatatacagat
agtcaggcattatttaacacatatgttgatgcgggaactcttatgaataattatgctcac
atctttgatcttctcacacgcttgcggcaggctgttgatcatccttaccttgttgtgtat
tctgcaactgctgctttaagaaatggaaacaaggctaatattgataacactgagaaagtt
tgtggcatttgtcatgatccagcagaagatcaagtggttactgcttgtgaacatgtcttt
tgcaaggcatgcttaattgatttttctgcttccctgggacaagtttcatgccctacatgc
tcaaaattgcttactgtggatctgactacaagtgtgggtgctggtaatcagactactaaa
actaccattaagggttttagatcctcaagcattttgaacagaattcagcttgagaatttt
cagactagcacaaaaatagaggctttgaaagaagaaatcagattcatggttgaaagagat
ggttctgcaaagggaattgtttttagccagttcacatcattcttggatctcattcactac
tccttgcaaaagtcaggtgtcaactgtgttcagttggttggaagcatgaccatgtctgcg
agggatactgctataaagagattcactgaggatccagactgcagaattttcttaatgagc
ttgaaagccggaggtgttgctcttaatcttacagtcgcatcacatgttttcttgatggac
ccatggtggaatccagccgtggagcggcaagcacaagatagaatccaccggatagggcag
tacaaaccgatcagaattgtgagatttgtaattgagaacacaattgaggaaaggattttg
aagctacaggagaagaaggagctagtgtttgagggcaccattggtggttctacagaggct
ctcgggaaattgactgaagctgacttgaaattcttgtttgtcacctaa
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