Rosa chinensis (China rose): 112188431
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Entry
112188431 CDS
T06020
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00906
Carotenoid biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112188431
Enzymes [BR:
rcn01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
112188431
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GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
GIDA
FAD_binding_2
HI0933_like
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
112188431
NCBI-ProteinID:
XP_024183318
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Position
2:6972848..6976187
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AA seq
535 aa
AA seq
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MDCVGIGARNFTAMTVSFCPTGRRGFIPSTRKEASFFRYGALCNKHSLLQVRATAGSVAV
KEGFADEEDYVKGGGSELLFVQMQRNKAMEKQSKLVDKLPPIRDDVLDLVVIGCGPAGLA
LAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWQDTIVYLDDESDPIL
FGRAYGRVCRNLLHEELLRRCVESGVSYLSSRVESIVEGSNGHSLIACEHGINVPSRLAT
VASGAASGKLLQYEVGGPKVSVQTAYGVEVEVESYPYDPNLMVFMDYRDYTKQKVSCLEA
EYPTFLYAMAMSPTRIFFEETCLASKDAMPFDLLKKKLLSRLKTLGIRIVKTYEEEWSWI
PVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIAKILKQDHPKASLSR
QINNQNISMQAWNTLWPPERKRQRSFFLFGLALILQLDIEGIRTFFDTFFRLPTWMWQGF
LGSSLSSADLMLFALYMFVIAPNSLRSRLVKHLLSDPTGATMIKTYLTANLNSFP
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggactgcgttggaatcggagctcggaactttacggcaatgacggtgtcgttttgcccc
actgggagaagagggtttatcccaagtactagaaaggaagcttctttctttcgctacggt
gctttgtgtaacaagcattctctgctccaagtgagagccactgccggaagtgtggctgtc
aaggaaggctttgcggatgaggaagattacgtgaagggcggtgggtcggagcttcttttc
gtccaaatgcagcggaacaaggccatggagaaacagtctaaactcgtcgataagcttccg
ccaataagggatgatgtactggatttggtggtgattggttgtggtccggcgggtcttgct
ctggctgccgagtcggctaagttgggattgaaagttgggctcattggccctgacctgcct
ttcacaaacaactatggtgtttgggaagatgaattcaaagaccttggactagaagggtgt
attgagcatgtttggcaggacaccattgtgtatcttgatgacgaaagcgatcccattttg
ttcggtcgtgcttacggtcgtgtgtgccgaaatttgctccatgaggagcttttgagaagg
tgtgtagagtcaggtgtttcataccttagttcaagggtggagagtattgttgaaggtagc
aatggccatagccttatagcatgtgagcatggtatcaatgtcccctctaggcttgctact
gttgcatcaggagctgcttcagggaagcttttgcaatatgaggtgggtggtccaaaggtc
tctgtccaaacagcttatggagtggaggttgaggtggaaagttatccatatgatcccaac
ctgatggttttcatggattatagagactacacaaaacaaaaagtttcatgtttggaagca
gaatatcccacatttctttatgccatggccatgtccccaacaagaatattctttgaggaa
acttgcttggcttcgaaagatgccatgccttttgatttattgaagaaaaagctcttgtca
aggttaaagacattgggaattcgtattgtaaaaacttatgaagaggaatggtcttggatt
ccagttggggggtcattaccgaatacagagcaaaagaatttggcatttggtgctgctgct
agcatggtacatccagccacagggtactcagtagtgagatctttgtcggaggccccaaaa
tatgcttctgtgattgcaaagattttgaagcaggatcatcctaaggccagtcttagccgt
caaataaataatcagaatatctcaatgcaagcctggaataccctctggccaccagaaagg
aaacgccaaagatcattcttcctgtttggactagcgctcattctgcaactggacattgag
ggcattaggacattcttcgacaccttcttccgcttacctacttggatgtggcagggtttt
ctcgggtcttctctgtcctcggctgatctcatgctctttgccttgtatatgtttgttata
gcaccaaatagtttgagaagtcgtcttgtcaaacatctattatcagatcctactggagcc
actatgataaaaacctatctcacagcaaacttgaattccttcccttag
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