Rosa chinensis (China rose): 112189254
Help
Entry
112189254 CDS
T06020
Name
(RefSeq) transcription factor PIF4
KO
K16189
phytochrome-interacting factor 4
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112189254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112189254
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112189254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
112189254
NCBI-ProteinID:
XP_024184315
LinkDB
All DBs
Position
2:69890074..69894098
Genome browser
AA seq
538 aa
AA seq
DB search
MNSCIPDWNFEGDLPLTNQKKPLGPDHELVELLWRNGQVVLHSQTNRKPGPNPNESRQVQ
KHDQIRVGGFYGNSGNLIHDEDAVSMIQYPIEDSFDKEFSHFFSELPSCDSLEIEKPIKQ
FGEEKFVKFDAPSTTHLVSSSPQPNVKSSTGVAYPENPMPPPRFQISNPTEKNQNLGGLG
KIVNFSQFSTLGKGVVGSSRKQLGGKDPGKLNQAEVRECSMMTVGSSYSGSNQVPNDFDV
SRASSNGDGTTGFSTGPLYNNVQKMMPLSEGGMTETLDPTLTSSSGGSGSSFGRGGKQSN
VVNSNKRKGRDAEDSECQSEAAEIESAAGNKPAQRSGSSRRTRAAEVHNLSERRRRDRIN
EKMKALQELIPHSNKTDKASMLDEAIEYLKSLQLQLQVMWMGGGMAPMMFPGVQHYMSRM
GMGMGPPAMPSMHNLMQLPRVPLVDQCMTVTPPTNQAVMCQTPVLNPVDYHNQMQNPSIQ
EQYARLMGFHHMQTMSQPMNMFRFGSQPLPQSQMMAPTGMNTGPLSGGAATNDALSGK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttgcattcctgattggaactttgagggtgatctccctttaaccaatcaaaag
aaacccttggggccagatcatgaactggtagagctgttatggagaaatgggcaggtagtt
ttgcacagccaaacaaatcgaaaaccaggtcctaatcctaatgagtcgaggcaagttcag
aaacatgatcaaataagggttggtgggttctatgggaactcaggtaatttgattcatgat
gaggacgcagtctccatgatccaataccctatagaagattcctttgataaagagttttcc
catttcttttctgaactgccttcctgtgattcacttgagattgaaaagccaatcaaacaa
tttggagaagagaagtttgttaagtttgatgctcctagtaccacccatcttgtttcctct
tcaccccaacctaatgtgaagtcctctaccggtgtggcatatcctgaaaatccaatgcct
cctccaagatttcagatcagtaatccaactgagaaaaatcaaaatcttggaggcttgggg
aaaatagttaatttttctcaattttcaacactgggaaagggtgttgtaggatcttccaga
aaacaattaggagggaaagatcctggtaagttgaatcaagcagaagttagagagtgttct
atgatgactgttggatcgagttactcaggtagcaaccaagttcctaatgactttgatgtg
agtcgggcttcaagcaatggtgatgggactactggtttttctactggacccttgtacaac
aatgttcaaaagatgatgcctctgagtgagggagggatgacagaaacccttgatccaact
cttacttcatcttcgggtggttctggcagtagttttggcagaggagggaagcagtctaat
gttgtcaatagcaacaaaagaaagggtagagatgcagaggactcagagtgccaaagtgag
gcagctgaaattgaatcagctgcgggaaacaagccagcgcaacgatcaggatcatcgagg
aggacacgtgctgctgaagtccataatctctcagaaaggagacgaagagatcggatcaat
gagaaaatgaaggcactgcaagagctcatacctcattctaacaagacagacaaagcatca
atgttagatgaggcaattgaatacttgaagtctcttcagctgcaacttcaggtaatgtgg
atgggaggtgggatggcaccgatgatgtttccaggagtacagcactatatgtcccgaatg
ggaatgggaatgggaccgcctgccatgccttctatgcacaatctaatgcaattacctcgg
gtccctctagttgatcagtgcatgactgtgactccaccaacaaaccaggcagtaatgtgc
caaacacctgttctgaatcctgttgattaccataaccagatgcaaaatccctctattcag
gagcaatatgcacgtctcatgggattccatcatatgcagaccatgtctcagcctatgaat
atgttcagattcggctctcagcctcttccgcaaagtcaaatgatggcaccaactggcatg
aacactggacctttaagtggtggagctgcaactaatgatgctttgagtggcaaatga
DBGET
integrated database retrieval system