Rosa chinensis (China rose): 112191543
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Entry
112191543 CDS
T06020
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112191543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112191543
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112191543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
AAA_23
AAA_15
Arf
AAA
ORC-CDC6-like
Zeta_toxin
nSTAND3
AAA_30
AAA_7
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
112191543
NCBI-ProteinID:
XP_024186675
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All DBs
Position
3:6724787..6726258
Genome browser
AA seq
318 aa
AA seq
DB search
MGVKQGSEPTIVINRLKFTYPGINGHPPPGAKPLIDDFSLTLNAGDRCLLVGSNGAGKTT
ILKILGGKHMVDPSMVRVLGRSAFHDTALTGSGDLSYLGGEWRRDVAFAGFDVPIQMDVS
AEKLINGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLRPYKVLLLDEI
TVDLDVLARADLLQFLRKECEERGATIIYATHIFDGLENWPSHIVYVANGKLQLSMPMDK
VRETYKLSLMRTVESWLRKEREEERARRKERKARGLPEFDEQIEGNRVINNGWAAGRLNS
TVAGEENFVWSSNRVLRQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaagcaaggttctgaaccaacgatcgtgatcaaccggctcaaattcacctac
ccgggaatcaacggccacccgccgcccggcgccaagcctctgatcgacgacttctccctc
acgctcaacgccggcgaccgatgcctcctagtcggatccaacggcgccgggaaaaccacg
atcctcaagattctcggaggcaagcacatggtcgaccccagcatggtccgggttctgggt
cggtccgctttccacgacaccgctctcaccggctccggcgacctgtcgtatctgggagga
gagtggcggcgtgacgtggcgtttgccgggttcgacgttccgatacagatggatgtttcg
gctgagaaattgataaacggggtggctgggattgacccacaaaggagagctgagctgatc
aaggtgttggatattgatctttcatggaggttgcacaaggtctcagatggtcagagaaga
agggtccagatctgtatgggtctgctcagaccatataaggtgcttctgctggatgagatc
acagtggaccttgatgtgctagcgagggcggaccttctccagttcttgaggaaggaatgt
gaggagcgaggtgctacgatcatttacgcgacgcatatcttcgacgggttggagaattgg
ccatcacacattgtgtatgttgctaatgggaagctgcaattgtcaatgccgatggacaag
gttagggagacgtacaagctgtcgctcatgagaacagttgagagttggctgaggaaggag
cgcgaggaggagagggcgagaagaaaagagaggaaggcaagaggtcttcccgagtttgat
gaacaaattgagggcaaccgtgtgattaataatggttgggcggccgggcgcctcaactcc
accgtcgccggagaagaaaactttgtgtggagctcaaacagagttctcaggcaatag
DBGET
integrated database retrieval system
