Rosa chinensis (China rose): 112192627
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Entry
112192627 CDS
T06020
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112192627
Spliceosome [BR:
rcn03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112192627
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
Cnd1
INTS4_8HBD
Cnd3
Motif
Other DBs
NCBI-GeneID:
112192627
NCBI-ProteinID:
XP_024188200
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All DBs
Position
3:complement(9630463..9635314)
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AA seq
927 aa
AA seq
DB search
MEEDHAPGACSHSLNLPSISPTEPLSTETLASLRSLIINPSTPSPAISSILETLTRSLQL
SRDPLRTLKLLSDLAARHPHLSALVFHSVRSDSLLSTESTRVAAESLDVLASIAERNREL
APAVEEIDDRLFASICFSPSPAIRPWLLRNAERFGVKPYLLSSLFLGFTKDPYPNVRKAA
LDGLVGLSKSGVIDDGDMIRGCYFRAGELLNDMEDGVRSAAIQAVFAWGLILMVCDSEAK
AYWSDEVFVKICSMVRDMSMEVRIEAFHALGKIGMVSEDILLQTLSKKVLVATKEKKSLA
QCSDEQLEVSGSIVAGAFMHGLEDEFHEVRKAACHSLGTLTILSSKFAGEALNLLMDVLN
DDSMLVRLQAFETMHQMATFGHLKVQEKHMHMFLGTLVDRNTLTRSAARKVLKLAKLPDL
KLFRSTIDTLLDNLEMCPQDEADILNVLFHIGRNHGKFVVRIIEEVSQQMEPVSNGKLGF
DNVRVGALLVLAISAPLSQERDCSIPPSIFSYAVTYLGRISHALSDIIHQEGLLNYLSQC
SRSSGPYDMEFDFSAKRGGTSEILSPTVKKPREAGNSLVEYSLDVQDEVTKSMNVVLEKV
KDIWPFVQAGFTTEGLRTLRSCREELATLTSGSIASGGSFAFTMQYIKIMKLLAKAWVNF
VPSRHLPSSGMGDLDFVLGKLDARLSELKSTFIGLSKVEELHILELVLVTCMLKLSKVEI
CCHLGTLRKLSCTMAHAESLLEDGTVEPSRFMIEVRKLLSEIGTSLNGSSCNPVLFRRVL
ESFFLERLVLCGGLKHIKADLDIPDNDYEHPLCFVAGLPVGIPCHITLHNVSVESRLWLK
MTANGIDDTHFVSLDSNLFGGCDDHRIVVFTAPFYKTPKAFSFTVSVCICMEYLSEDEDV
SFLKRCGPRHELASLCREKEVFLSMVK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaccacgcgcccggcgcgtgcagtcactctctcaacctcccatcaatttcc
cccaccgaacctctctccaccgaaaccctagcttccctgagatccctaatcatcaacccc
tcaactccctcccccgcaatttcttcaatcctcgaaaccctaactcgctctctccaactc
agtcgcgacccgctccgcactctcaagctcctctccgacctggccgcccgacacccccac
ctctccgccctagtcttccactccgtccgctccgactcgctcctctccaccgagtcgact
cgcgtcgccgccgagtcactcgatgtcttggcttcgatcgcagagcggaatcgagagcta
gcgccggctgttgaggaaatcgacgaccggttgttcgcctcgatttgttttagtccttct
ccggcgatacggccgtggcttctcagaaacgccgagaggttcggtgttaagccttacttg
ctatcaagcctgtttctagggtttacgaaggatccgtatccgaatgtgaggaaagctgca
ttggatggactcgttggtttgagtaagagcggcgttattgacgacggtgatatgatcaga
ggctgctacttccgcgccggtgagcttctaaacgacatggaagacggcgttaggtccgct
gcaattcaagcggtgtttgcttggggtctaatcctcatggtgtgcgattcggaggcgaaa
gcatactggtctgatgaagtatttgtcaagatttgttcgatggtaagagacatgagcatg
gaggtcaggattgaagcttttcatgcccttgggaagataggaatggtatctgaagatatt
cttttgcaaaccctgtcaaagaaagtcctggtggctacaaaagaaaagaaatctcttgct
cagtgttccgatgaacaactggaagtatcagggtctattgttgcaggagcttttatgcat
ggacttgaggatgaattccatgaggtacgaaaagctgcatgtcattctttgggtacactc
accatactctcttccaagtttgctggagaagccttgaacttactgatggatgtactgaat
gatgactcaatgcttgtgcggttacaagcttttgaaactatgcatcaaatggcaactttt
ggtcatctgaaggtgcaagaaaaacacatgcatatgtttcttggcactctggttgaccgt
aataccctgacaagatctgctgcaaggaaagtacttaaattggcaaagctgccagatttg
aagttgtttagatcaactattgatacccttttagataacttggaaatgtgtccacaggat
gaagcagatatattaaatgttttgtttcatattggacgaaatcatggaaagtttgtggtc
cgcattattgaggaagtttctcagcagatggagccagtgtctaatggcaagttaggcttt
gataacgtgagggtgggtgccttgctagttctggccatctcagctccactttcacaagaa
cgtgattgcagtatcccacctagtatattttcttatgcagttacatacctgggaagaatt
tcacatgctttgagtgacattattcatcaagagggcctgttgaattacttgtctcaatgc
agtagatcctctggaccgtatgatatggagtttgacttcagcgcgaaaagaggtggaacc
tctgaaatcttgtctccaacagttaagaaaccaagggaggctggaaattctcttgtagag
tacagtctagatgtgcaagatgaagtgaccaagtcaatgaatgttgttcttgaaaaggtg
aaggatatctggccatttgtacaagctggattcacgactgaaggactcaggactttaaga
agttgcagggaagaattggcaacattgacgtctggctctattgcatctggtggtagcttt
gcctttacgatgcagtatatcaagatcatgaaactgcttgcaaaggcatgggtgaacttc
gtgccttcaagacaccttccttctagcgggatgggagacttggactttgtgttgggaaag
ctagacgcgaggcttagtgaactgaaaagtacgtttataggattgtctaaagtggaagag
ttgcatattttggagctggtacttgtgacttgtatgctcaagctttctaaagttgaaatt
tgctgccatcttggtactttgagaaagctctcttgtacaatggcacatgcggaatctctc
cttgaagatggaactgttgaaccatccaggtttatgattgaagtcagaaaattattatct
gaaattgggacatctctcaatggtagttcctgtaatccagttctttttagaagagtactg
gaaagtttcttccttgagcggcttgtgttatgtggtggactaaagcacataaaggcagat
ctggacatacctgacaatgactacgaacatcctctttgctttgtcgcagggttgcccgtt
ggtataccatgccacatcactcttcataatgtttcggttgaaagcagattatggctcaaa
atgactgccaatggaattgatgatactcactttgtctccttggattcaaacctttttgga
ggctgtgatgatcatagaatagttgtgtttaccgcaccattttacaaaaccccgaaagca
ttttcttttacagtcagcgtttgcatttgtatggaatatttgtctgaggatgaggatgtg
tcttttctcaaacgttgtggacctagacatgagcttgcatctctttgccgagaaaaggaa
gtttttctttctatggtcaagtga
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