Rosa chinensis (China rose): 112196401
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Entry
112196401 CDS
T06020
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03420
Nucleotide excision repair
rcn04120
Ubiquitin mediated proteolysis
rcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112196401
04120 Ubiquitin mediated proteolysis
112196401
09124 Replication and repair
03420 Nucleotide excision repair
112196401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112196401
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112196401
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
112196401
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
112196401
Multi subunit type E3
SCF complex
Ring finger protein
112196401
Cul2 complex
112196401
Cul3 complex
112196401
Cul4 complex
112196401
Cul7 complex
112196401
Cul8 complex
112196401
Cul9 complex
112196401
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112196401
TCR (transcription coupled repair) factors
Cul4-CSA complex
112196401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
112196401
NCBI-ProteinID:
XP_024192502
LinkDB
All DBs
Position
1:45030673..45032744
Genome browser
AA seq
117 aa
AA seq
DB search
MATLDSDVPMVPAGEGSSGAGPSSVKKSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattggattccgacgtgcccatggttccggcaggcgagggatccagcggtgct
ggcccttcttcagttaagaagtccaagcgattcgagatcaagaagtggaatgctgtggct
ctctgggcttgggatattgttgtggacaactgtgctatatgcagaaaccatatcatggat
ctttgcattgagtgccaagcaaaccaggcaagcgcaacaagcgaggagtgtacagttgct
tggggggtttgtaaccatgcatttcactttcactgcataagcagatggctcaagacccgc
caagtgtgtccattagataacagcgagtgggagtttcagaagtatggtcattag
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