Rosa chinensis (China rose): 112198494
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Entry
112198494 CDS
T06020
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112198494
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112198494
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112198494
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
112198494
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112198494
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112198494
Prokaryotic type
Other AARSs
112198494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
KDZ
Motif
Other DBs
NCBI-GeneID:
112198494
NCBI-ProteinID:
XP_024195395
LinkDB
All DBs
Position
4:47935599..47948669
Genome browser
AA seq
1088 aa
AA seq
DB search
MNFKSLASSSSREAATMAMIQTTPYKVLSQRTRSTFRGTASVGLFYFRGRSSAKEFSLFN
ITHYSTHSSDEFASSSKRRSRGPVMAAKKAAEGGKQQDGKYKHTVDLPKTSFGMRANSST
REPELQKIWEDNQVFKRVVSKNTGENFILHDGPPYANGDLHIGHALNKILKDMINRYKLL
QNYKVHYVPGWDCHGLPIELKVLQSLDQAARKDLTPIKLRAKAAKFAKQTVKNQMESFKR
YGIWADWNNPYLTLDPEYEAAQIEVFGQMVLQGFIYRGRKPVHWSPSSRTALAEAELEYP
ESHVSRSIYTAFKLVSAPPTSGGLLNEYPDVCLAIWTTTPWTIPANAAVAVNAKLIYAIV
EVQSVSEDVSSSAGNSKQTPANFLKEEKKPFLIVASDLVPTLEAKWGLKLVVRKRVSGSY
LENCRYIHPIFNRECSVVIGGDYITTESGTGLVHTAPGHGQEDYVTGLKYGLPILSPVDD
DGKFTEEAGKFCGLDVLADGNIAVVKYLDEHLSLIMEESYKHKYPYDWRTKKPTIFRATE
QWFASVEGFREAVMDAIGNVKWIPPKAENRISAMTSSRSDWCISRQRTWGVPIPVFYHLQ
SKEPLMNEETIDHIKSIISEKGSDAWWYMKVEDLLPNKYRDKASEYEKGTDTMDVWFDSG
SSWAAVLGKRKSLSLPADLYLEGMDQHRGWFQSSLLTSVATKGKAPYSSVITHGFVLDEK
GLKMSKSQGNVVDPRTVIEGGKNQKDGYGADVLRLWVSSIDYTGDVMIGAQVLRQMSDIY
RKLRGTLRYLLGNLHDWHADNAISYHDLPMIDQHALFQLENFVNNSRECYESYQFFKIFQ
IIQRFVIVDLSNFYFDIAKDRLYVGGTTSFTRRSCQTVLAELLLSIVRVIAPILPHLAED
VWQNLPFQYTDKNGSVAEFVFESRWPASNETWLSLSKEETDFWTKILELRTEVNKVLEIA
RTTKLIGSSLDAKVYLHTSDSGLASRLVQISAAKNDADTLNRIFITSQAEVLPSLEDDWI
ANIPHKGECQVDESIKVWIGVSRAEGLKCERCWNYSPQVGSFPDHSTLCSRCYDVVDIQQ
AAAEAVVV
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaaatccttggcttcaagctcatccagagaagccgccacaatggccatgatt
caaaccactccatacaaggttctgtcgcaaagaactcgctcaacttttcggggcacagct
tctgttggcttgttttatttccgaggaaggtcttctgcgaaagaattctccctctttaat
atcacacactattctacccattccagtgatgagtttgcttcttcctcaaagcgaaggtct
cggggacctgttatggctgcaaagaaagcggctgaagggggaaagcagcaggatggaaaa
tacaagcacacggtcgatctgccaaagacatcatttggcatgagagcgaattcttcaaca
cgagagcctgaacttcagaaaatatgggaggacaatcaagtgttcaagagagttgttagt
aaaaatacaggggaaaacttcattcttcatgatggtcctccgtacgccaatggtgatctg
cacatcggccatgctctaaataagattttaaaggatatgattaatcgttataagcttctt
cagaattataaagttcattatgtgcctggttgggattgtcatggcttaccaattgaattg
aaagtcctgcaatcccttgatcaagctgctcgaaaggatctcacaccaataaagttgaga
gcgaaggcagctaagtttgccaagcaaacagttaaaaatcagatggaatcatttaagcgt
tatggaatatgggcagactggaataatccctacctgactcttgatccagaatatgaagct
gctcagatagaagtgtttggtcagatggtccttcaaggttttatctacagaggcaggaaa
ccagttcactggagtccctcatcacgaactgcccttgcagaggctgagttggagtatccg
gagagtcatgtttcaaggagcatctataccgctttcaaattagtgagtgcacctccaact
tcaggtggcttattgaatgagtatccagatgtttgcttggccatttggacaactactccc
tggactattccagcaaatgccgcggttgcagtgaatgccaagcttatatatgccattgtt
gaagtacagtcagtctccgaagatgtttcttcatctgccggaaatagcaagcaaacgcct
gctaattttctcaaggaagaaaagaagcctttcctcattgttgcttcagatcttgtgcca
actctagaagcaaaatggggcctgaagcttgttgttaggaaaagggtgtcaggttcatat
cttgagaactgcaggtatatccatccaatatttaatagagaatgctcagttgtgattgga
ggagattatatcacaacagagtcgggaactggactggtccatacagctcctggacatggt
caggaagattatgtcactggccttaagtatggactgcctattctttctccagtagatgat
gatggaaagttcacagaagaagctggaaaattttgtgggcttgatgtacttgctgatggt
aatattgctgttgtgaaatacttggatgagcatttgtcactgatcatggaagaatcctac
aaacataagtatccatatgattggagaacaaaaaagcccactatatttagggcaactgag
caatggtttgcatcagtggaaggctttcgtgaggctgttatggatgcaattggcaatgta
aaatggattccacctaaggcagaaaacagaatatctgcaatgacttctagccgctctgat
tggtgtatatcgcggcagaggacttggggtgttccaattccagtcttttatcacctccag
tcaaaggaacctctaatgaatgaggagactattgatcatatcaagtctataatttctgaa
aagggtagcgatgcatggtggtacatgaaggtagaggatcttctccctaataaatatcgt
gataaagcatccgaatatgaaaagggaactgacacaatggatgtatggttcgactcaggc
tcttcttgggctgcagttttaggaaaaagaaaaagccttagtctccctgcagacttgtac
cttgaaggtatggatcagcatcgtgggtggttccagagttctttgttaacaagtgttgct
acaaaaggaaaggctccatattccagtgtcataacacatggatttgtattggatgagaag
ggtttaaagatgagcaaatctcagggtaacgttgtagacccaagaactgtgattgaagga
gggaagaaccaaaaggatggctatggagctgatgttctgcgtctctgggtttccagcata
gattatacaggcgatgttatgataggtgctcaagttctccgtcaaatgtcagatatatat
aggaagctacgaggaacattgagataccttttgggaaatctgcatgattggcatgctgat
aatgctatttcataccacgatcttcccatgattgatcagcatgcactgtttcaacttgaa
aattttgtaaacaacagcagagagtgctatgaaagttatcagttctttaagatatttcag
atcatacagcggtttgtcattgttgacctatcaaatttctactttgatattgccaaagat
cgtttatacgttgggggcacgacaagttttactaggagaagttgtcagacggttcttgca
gaactgctcctttctattgtgagagtgattgctccaatattgcctcatttggctgaggat
gtatggcaaaatcttccattccagtacactgacaaaaatggctctgttgcggaatttgtt
tttgaatcaagatggccagcttcgaacgaaacatggctctctctttctaaagaggaaact
gatttctggactaaaattcttgagctgagaaccgaggtgaataaagtgttagagattgct
cgtacaacaaagttaattggctctagcttagatgccaaggtctacctccatacatcggat
tctggtctggcctcaagattggttcaaatatctgcagccaagaacgatgcagacacattg
aatcggatattcataacttcccaggcagaggttcttccatccttagaagatgactggatt
gcgaatataccacataaaggagaatgtcaagttgacgaaagcattaaagtttggattgga
gtgtctcgcgctgagggtctaaagtgtgaaagatgctggaactattcacctcaggttggt
tcctttccagaccacagcactctttgcagccgctgctatgatgtggttgatattcaacaa
gctgcagctgaagctgttgtcgtttga
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