Rosa chinensis (China rose): 112202499
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Entry
112202499 CDS
T06020
Name
(RefSeq) xanthine dehydrogenase 1 isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00230
Purine metabolism
rcn00232
Caffeine metabolism
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
rcn01232
Nucleotide metabolism
rcn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
112202499
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
112202499
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112202499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112202499
Enzymes [BR:
rcn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
112202499
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
112202499
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
112202499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
CO_deh_flav_C
Ald_Xan_dh_C
Fer2
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-GeneID:
112202499
NCBI-ProteinID:
XP_024199276
LinkDB
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Position
5:complement(52913341..52925109)
Genome browser
AA seq
1365 aa
AA seq
DB search
MGSLKSEEEAGEDSNEAILYVNGIRRVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGA
CTVMVSHYDQKLKKCLHYAVNACLAPLYSLEGMHVITVEGLGNHKQGLHPIQESLAQSHG
SQCGFCTPGFIMSVYALLRSSQTPPNEEQIEECLAGNLCRCTGYRPIVDAFRVFAKTDDK
PYIDISSLSLEGGEFVCPSTGKPCSCGLKSEISSNRHKMGTCDERYAPVSYSEIDGSTYT
DKELIFPPELMLRKSTYLHLNGFSGLKWFRPLRLKQVLELKEKYPDAKLLVGNTEVGIEM
RLKKIQYRVLISVTHVPELSILNLKDDGLEIGSAVRLSELLKFLRKVITERAAHETSSCK
AFVEQLKWFAGMQIRNVACVGGNICTASPISDLNPLWMAARATFRIVDSKGNIRTTPAEK
FFLGYRKVDLGSGEILLSVFLPWTRPFEYVKEYKQAHRRDDDIAIVNAGIRVHLEERGEN
IVVSDASIVYGGVAPLSLSATRTKDFLTGKSWNQELLQGALKIIQKDVLLGDNAPGGMVE
FRKSLTLSFFFKFFLWVSHQLEREKGLKGSVPLSHLSAIQPFDRPSVIGTQDYEITKHGT
AVGSPEVHLSSKLQVSGEAEYADDTPLPPNGLHAALILSKKPHARILSIDDSGAKLSPGF
AGIFFAKDVPADNKVGPVVVDEELFASEFVTCVGQVIGVVVADTHEKAKLAAMKVHVEYE
ELPAILSIQDAINANSFHPNTERRFRKGDVDLCFQSCQCDKVIEGEVLVGGQEHFYLEPQ
SSVIWTMDGGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVICKTKRIGGGFGGKETRSAF
IAAAASVPSYLLNRPVKITLDRDTDMMITGQRHSFLGKYKVGFTNEGKVLALDLLIYNSA
GNSLDLSLPVLERAMFHSDNVYEIPNVRIVGRVCFTNIPSNTAFRGFGGPQGMIIAENWI
QRIAVELNKSPEEIREINFQGEGSILHYGQKLQHCTLAPLWNELKLSCEFSKARSEVCQF
NTHNRWRKRGVAMIPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVA
QVAASAFNIPLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPIASQ
HNFSSFAELAGACYVARIDLSAHGFYIVPEIDFDWTTGKGNPFRYYTYGAAFAEVEIDTL
TGDFHTRVANIFLDLGYSLNPAIDVGQIEGAFIQGLGWVALEELKWGDPAHKWIAPGSLY
TCGPGSYKIPSINDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIKDAIIA
ARAEVGCNEWFPLDNPATPERIRMACLDEFTAAFASSDFRAKLSV
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgttgaagagcgaagaggaggccggggaggactcgaacgaggccatattgtat
gttaatggaattcgtcgagtcttgcctgatggattggctcacctcaccctccttgagtac
ctcagagacataggtctcacggggacaaagcttggttgtggtgaaggtggttgtggtgcg
tgtactgtaatggtttcgcattatgaccaaaaactgaagaaatgcctgcactacgccgtt
aatgcatgcttggctccactgtattctttagaagggatgcacgtaattacagtggaagga
cttgggaaccataaacaaggcctgcacccaattcaagaatcattggcacaatctcatggc
tcacaatgtggattttgcacccctggttttatcatgtccgtctatgcgttattaaggtca
agtcagaccccacctaatgaggagcagattgaagaatgtttagcaggaaacttgtgtcga
tgcactggttacagaccaattgttgatgcttttcgtgtctttgccaaaacagatgataaa
ccgtacattgacatatcatctctaagtcttgaaggaggtgaatttgtgtgcccttcaact
ggtaaaccttgttcgtgtggattaaaaagtgagatatcaagcaaccgtcacaaaatgggt
acttgtgacgagaggtatgcacctgtatcgtatagtgaaattgatggaagcacatacacg
gacaaggaacttatatttcctcctgagctcatgttgagaaaatcaacttatttacatttg
aatggattcagtgggttaaagtggttcagacccttgagacttaagcaagtactagagtta
aaagaaaaatacccagatgcaaagttattagtaggtaatactgaggtaggaattgaaatg
aggttgaaaaaaattcaatatcgggttttaatttctgttacacatgtacctgaacttagt
atactgaatctgaaggatgatggacttgagataggttctgcggtaagactttctgaacta
cttaaattcttaagaaaggtcataacagaacgtgcagctcatgaaacttcttcctgtaag
gcttttgttgaacaattaaaatggtttgctgggatgcaaataagaaatgttgcttgtgtg
ggtggaaatatctgtacagccagtccaatttcagacttgaaccccctttggatggctgcc
agagcaacttttcgaattgttgattccaaagggaacattagaaccacgccggcagaaaag
tttttccttggttaccgtaaggtggatctgggaagtggtgaaattctactttctgtattt
ttaccttggactaggccgtttgagtatgtgaaagaatataaacaagctcacagaagggat
gatgatattgcaattgtgaatgctggaattcgtgttcatcttgaggaaagaggtgaaaac
attgtagtttctgatgcatctattgtttatgggggtgtagctccactctctctttctgca
acaagaacaaaagactttctcactggaaagagttggaaccaggagctattgcagggtgct
ctgaaaatcatccagaaggatgtattgctcggagataatgctcctggtgggatggtggag
tttcgtaagtctttgacacttagctttttcttcaagttttttctgtgggtttctcatcag
ctggaaagggaaaaaggccttaagggaagtgtaccattgtctcatctttctgctatacaa
ccatttgacaggccatctgttataggaactcaagactatgaaattacaaaacatgggaca
gctgttgggtctcctgaggttcatctatcatcgaaacttcaggtttcaggagaggcagaa
tatgctgatgatacaccattgcctcccaatggcttgcatgccgcgttaatattgagcaaa
aaacctcatgctcgtatactttcaattgatgattcaggagcaaagttatcgcctgggttt
gcaggcatattttttgccaaggatgttccagctgataataaagttggacccgttgttgtt
gacgaggaactatttgcttcagagtttgtcacttgtgtaggtcaggttataggagtggta
gttgcagatacacatgaaaaggcaaaattagcagcaatgaaagttcacgttgagtatgaa
gagctcccagccatcttatcgatacaggatgccatcaatgctaatagtttccatcctaat
actgagaggcgttttaggaaaggagatgtggatctttgctttcaatcatgtcaatgtgac
aaggtcatagagggggaagttctagtgggaggccaggaacacttctatttggagccacag
agcagtgtgatatggacaatggatggtggcaatgaagttcatatgatctcatccactcaa
gctcctcagaagcaccagaagtatgtttctcatgttcttggtcttccaatgtcaaaagta
atttgtaaaacgaagcgtattggcggcggttttggcggcaaggagacaagatcagctttc
attgctgctgcagcttctgttccttcatatctattgaatcgaccagtcaaaattacatta
gaccgtgatacggacatgatgataactgggcagcgccatagctttcttggaaaatacaag
gtgggctttacaaatgagggaaaggtgttggcattggatcttctcatctataatagtgct
ggaaattcactagatttgtctcttcctgtgcttgagcgtgctatgtttcactcggataat
gtctatgagattccaaatgtgagaattgtgggacgagtttgcttcactaatatacccagt
aacactgctttccgaggatttggtggtcctcaagggatgattattgctgaaaattggatt
caaagaattgccgtagaactgaataaaagcccagaagagataagagagattaattttcaa
ggtgaaggatcaatattgcattatggtcagaaacttcaacactgtacactggccccgctt
tggaacgaactaaaactatcttgtgaattttcaaaggctcgcagtgaagtttgccaattt
aatactcataatcggtggcggaagcgtggtgtagccatgataccaacgaagtttggcata
tcatttacattaaagctcatgaaccaggcaggtgctcttgttcatgtctacacagatgga
actgttctagtcacacatggaggagttgagatggggcaaggtttgcatacaaaagttgct
caggtggctgcttctgccttcaatattcctctcagttcagtcttcatatcagagacaagt
accgacaaggttcctaatgcttccccaacagcagcgtctgcaagttctgacatgtatgga
gctgcagtcttggatgcatgtgagcaaatcaaggcacgtatggaacctattgcttcacag
cacaatttcagctcttttgctgagctggcaggtgcatgctatgtggcccggatagatctt
tctgcccatggattttacattgtacctgaaatcgactttgattggactactggtaaaggc
aacccattcaggtactatacctatggggctgcttttgctgaggttgaaattgacactttg
actggagatttccacactagggtggcaaatatattcttggatcttggatactctctcaac
ccagcaattgatgttgggcagatcgaaggagcgtttatacaaggtttgggatgggttgcc
ctagaagaactaaaatggggagatcctgctcataagtggattgcaccaggttccctctac
acttgtgggcctggaagctacaaaattccttccataaatgacgttcccttaaaattcaat
gtttcacttctgaagggacatccaaatgtaaaggccatccactcatctaaagctgttggt
gagcccccatttttcttggcatcagctgtcttttttgctatcaaagatgccattatagct
gcaagagctgaagtagggtgtaacgagtggtttccacttgataatccagcaacaccagaa
cgtatacggatggcttgtttggatgaatttaccgcagcatttgctagctcagattttcgc
gcaaagctcagtgtttga
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