Rhodococcus coprophilus: NCTC10994_01092
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Entry
NCTC10994_01092 CDS
T06666
Symbol
gdhB_1
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr00220
Arginine biosynthesis
rcr00250
Alanine, aspartate and glutamate metabolism
rcr00430
Taurine and hypotaurine metabolism
rcr00910
Nitrogen metabolism
rcr01100
Metabolic pathways
rcr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
NCTC10994_01092 (gdhB_1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC10994_01092 (gdhB_1)
00220 Arginine biosynthesis
NCTC10994_01092 (gdhB_1)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
NCTC10994_01092 (gdhB_1)
Enzymes [BR:
rcr01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
NCTC10994_01092 (gdhB_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT2
GDH_ACT3
GDH_HM1
GDH_ACT1
GDH_HM2
Motif
Other DBs
NCBI-ProteinID:
SQI29535
UniProt:
A0A2X4WRF2
LinkDB
All DBs
Position
1:complement(1181898..1186709)
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AA seq
1603 aa
AA seq
DB search
MTDSTASQLDSSFLTVLTHAYEQSGEEIGDPATIAGAHLELGRDRMPGTAAVHVRPPGDD
PLGSTAQIVTDDMPLLVEAVLALFARLGVSVDAVVHPEFSVLRDDAGRLLGLSLANRTPG
DEADTALRVAESWMHVQFAVGADGPTAEAIEDGLRHALGDVRQVVSDTGPMLALQRELAS
ALDALAAAPPPRHTATVLAETADLLRWLGRGHFTMLGYRRYDFVDPEGSGVLHSRPVPGS
GLGVLRSADGDIDLLDLPPGARPDRRPLLVLTQGALPTTVHRSVYPYFVGIAVLDEEGGV
VGEHRFLGVLTVTALNDNILDIPLISRRVRSVIDRAHVDLTSYTGQAMLEIMQAIPRAEL
FSMDTATLYDTVSSVVDIRRQVRLFVRVDTHRRYVSCLVYLPRDRYTTKVRIAMQEILLR
EYGGGVLDYTARVSEGELALLHVTIRFPGRGRREIDTSDENRARIQSLLAETSRNWADRL
SEAAAGDTRVDAALVQRYADAVPEAYKEDFPSDRALSDLVLLDRLKVGEIETRLDRPDPS
VPRTWRFTLYVGDEAVTLGRVLPVLQSLGVQVVDERPYRVPRSDGMVCWIYDFGLEVPND
LEPGLLDTDPTLARRFTDMFVVAWRGDAETDRFNELVLRAGLAWRQAVMLRAYAKYLRQT
GFPYSQHNIEGVLLDHPDITVLLVGLFEARFDPDAASPGREEQITDELSSRIEAVTGLVT
DRILRALFSLIRSTLRTNYFVPADDGRARGRVLSMKLDPAGIPELPQPRPKFEIFVYAPD
VEGVHMRYGAVARGGLRWSDRREDYRTEVLGLVKAQAVKNAVIVPVGAKGGFVVKHTPEP
TGDAAADRQAVRARGELCYRRFISGLLDLTDNLDTSRTNVIPPQRVVRHDGDDTYLVVAA
DKGTASFSDLANSVAAEYDFWLGDAFASGGSAGYDHKEMGITARGAWESVKRHFRELGLD
TQSENFTVAGIGDMSGDVFGNGMLLSEHIELVAAFDHRHIFLDPEPDAARSFAERRRIFE
LPRSSWADYDPALIGEGGGVWERTRKSIPVSAAARRVLGLDDDVTELTPPELIRAILRAP
VDLLWNGGIGTYIKSESEAHADVGDKSNDAVRVDGGGVRARVIGEGGNLGVTQLGRIEYA
RTGGKINTDAIDNSAGVDCSDHEVNIKILLDSMVTAGELQVADRNPLLASMTDDVAELVL
ADNIGQNNVLGLERAAAPAMLAVHQRLIRTLEAEHGLDRSLDALPDDTEIARRLAAGEGL
TSPELSQLLAHVKLALVDELLETDVPDNDTFASRLPGYFPPALRDRFVAGIKAHPLRRQI
VATILANETVDNGGISFVYRLTEETGASSTDAIRAYAAVTAIFGLPAIWDRVRSERLPTD
VEDELLLESRRVLDRASRRLLSTRPQPLAVGAEISRYRDRFARLAPRVSEWVRGHHVEDF
ARRTAPVLERGAPVDPTEAVYYLLVQFVLLDVIDAADIVERDDEEVAELYYALDAHLGID
RLLSAVSVLEKGDRWHSLARLALRDDLYGSLIALVLDVFAGAEPGETTAEMIEDWELSNG
SRLVRARAALDEIFASGNLDLAILSVAARQIRSMVRTGASDRR
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgacggattcgactgcatcgcaactggattcgtcattcctgacggttctgacgcatgcg
tacgagcagtccggggaagaaatcggtgatcccgcgacgatcgccggcgcccacctcgaa
ctgggacgcgaccgcatgcccggtaccgcagccgtccatgtccgtccccctggcgacgac
ccgctcggctcgaccgcccagatcgtcaccgacgacatgcctctcctcgtcgaggcggtc
ctggcgttgttcgcccggctcggcgtgagtgtcgacgcggtcgtacatcccgagttctcg
gtgctgcgcgacgacgccggacgactcctcggactctcgctcgcaaaccgaacgccgggc
gacgaggcggacaccgcactccgggtcgcggagtcgtggatgcacgtgcaatttgccgtg
ggcgccgacggccccacggccgaggcgatcgaggacggccttcgccatgcgctgggcgat
gtccggcaggtggtctccgacaccggcccgatgctggctctccagcgcgaactcgcttcc
gcgctggacgcgctcgctgctgctccgccgccgcggcacaccgccaccgttctcgcagag
accgcagacctgctgcgctggctcgggcggggccacttcaccatgctcggttaccgccgt
tacgacttcgtcgaccccgagggatcgggtgttctccattcacggccggtgcccggcagc
ggcttgggggtgctgcgcagcgcggacggtgatatcgacctgctcgacctgccgcccggc
gcacgtcccgatcgccgtccgttgctggtgctgacacagggagcgctgcccacgaccgtg
caccgctcggtgtatccgtacttcgtggggatcgcagtcctcgacgaggagggtggtgtg
gtcggcgagcaccggtttctcggggtgctcacggtgacggccctgaacgacaacattctc
gacatcccgctgatctcgcgaagagtacgttcggtgatcgaccgcgctcacgtcgacctc
acgtcgtacaccgggcaggcgatgctcgagatcatgcaggcgatcccgcgcgccgaactc
ttctcgatggacaccgcaaccctctacgacacggtgtcgtcggtggtcgacatccgaagg
caggtccggttgttcgtgcgtgtcgacacgcaccgccgttacgtgtcgtgcctggtgtac
ctgccgcgcgaccggtacacgacgaaggtgcggatcgcgatgcaggagattcttctgcgc
gagtacggcggcggggtcctcgattacaccgcccgcgtgtccgagggtgaactggcgctc
ctgcacgtcaccatccgattcccggggcgaggccggcgcgagatcgacacgtccgacgag
aaccgcgcccggatccaatcgctcctcgccgagaccagtcgaaactgggcggaccggctt
tccgaggctgccgcaggcgatacccgcgtcgacgcggcgctggtgcagcgctacgccgat
gcggtgcccgaggcgtacaaggaggatttcccgtccgaccgtgcgctgtccgatctggtg
ctgctcgacaggctgaaggtcggcgagatcgagacgcggctcgaccggcccgacccctcg
gtgccccgcacgtggcgcttcaccctgtatgtgggcgacgaggccgtcaccctcggccgc
gtgcttcccgtcctgcagagcctcggcgtccaggtcgtcgacgaacgtccctaccgagtg
ccgcgatccgacgggatggtgtgctggatctacgatttcggcctcgaggtgcccaacgat
ctcgaacccggactactcgatacggacccgacgctggcgcggcggttcaccgacatgttc
gtcgtcgcctggcgaggtgacgccgagaccgacaggttcaacgaactggtgttgcgcgcg
ggactggcatggcgccaggcggtcatgctccgggcgtacgcgaagtacctgcgccagacc
ggctttccgtacagccagcacaacatcgaaggcgtgctgctcgaccacccggacatcacc
gtcctgctggtcggtctgttcgaagcgcgattcgatccggacgcggcgtcgcccgggcgc
gaggaacagatcaccgacgaactgtcctcgaggatcgaggctgtcaccggactggtcacc
gaccggatcctgcgcgcgctcttttcgctgatccgctccaccctgcgaacgaactacttc
gtcccggcggacgacggccgcgcgcgcggtcgtgtcctgtcgatgaagctcgatccggcc
gggatccccgaacttccgcagccgcgcccgaagttcgagatattcgtctacgcccccgac
gtggagggcgtgcacatgagatacggtgccgtggcacgcggcggtctgaggtggtccgac
cgccgggaggactaccgcaccgaagtgctcgggctcgtcaaggcgcaggccgtcaagaac
gccgtgatcgttccagtcggagcgaagggcgggttcgtcgtcaaacacacgcccgaaccc
accggtgacgcggccgcagaccggcaagccgtccgtgcccgcggggaactgtgttaccgc
agattcatctccggactcctcgacctgaccgacaatctcgacacatcccgcacgaatgtg
atcccgccgcagcgggtcgtgcggcacgacggtgacgacacctacctcgtcgtcgctgcc
gacaaaggcaccgcctcgttctccgacctcgcgaattcggttgcggccgaatacgatttc
tggctcggtgacgcgttcgcctccggtgggtcggccggatacgaccacaaggagatgggc
atcaccgcccgcggagcgtgggagagcgtcaagcggcacttccgtgagctggggctcgac
acccagtcggagaacttcaccgtggccggcatcggcgatatgagcggagacgtgttcggc
aacgggatgctgctcagcgaacacatcgaactcgtcgccgcattcgatcaccgccacatc
ttcctcgacccggaaccggacgcggcccgctcgttcgccgaacggcgccggatcttcgag
cttccccgatcgtcctgggccgattacgacccggcgctgatcggcgagggcggcggcgtg
tgggagcggacacgcaaatcgatcccggtcagcgccgcggcccggcgcgtactcggcctg
gacgacgacgtcaccgaactcaccccgcccgaactgatccgggcgatcctgcgtgccccc
gtagatctgctgtggaacggcggtatcggcacgtacatcaagtcggagtccgaagcacac
gccgatgtgggggacaagagcaacgacgcggtgcgggtcgacggtgggggcgttcgggca
cgggtgatcggtgagggtggcaatctcggagtcactcaactgggccgcatcgagtacgcc
cgcaccggcggaaagatcaacaccgacgcgatcgacaactcggccggcgtggactgctcc
gaccacgaggtcaacatcaagatcctcctcgactcgatggtgaccgccggcgaactgcag
gtcgccgaccgcaatcccttgctcgcctccatgaccgacgacgtcgccgaactcgtcctc
gccgacaacatcggccagaacaacgtcctgggtctggagcgggccgctgcacccgcgatg
ctcgccgtccatcagcgactcatccgcacactcgaagcggaacacggactcgaccgcagc
ctcgacgcgctgcccgacgacaccgagatcgcgcggcgtctcgccgcgggggaggggctc
acctcacccgagttgtcccaactcctcgcgcacgtcaaactcgcgctggtcgacgagttg
ctcgagaccgacgtgcccgacaacgacacgttcgcgtcgcgtctgccgggttatttccct
ccggcgctgcgggaccgattcgtagccggaatcaaggcacacccgctgcgcaggcagatc
gtcgcgaccatcctcgcgaacgaaaccgtcgacaacggtggcatctccttcgtgtaccgg
ttgacggaagagaccggtgcgtcgagcaccgacgcgatccgcgcgtacgccgcggtcacc
gcgatcttcgggcttcccgcgatctgggaccgggtccgcagtgaacggcttcccaccgac
gtggaggacgagttgctcctcgaatcgcgccgcgtactcgaccgcgcgtcgcggcgactg
ctctccacgcgtccgcagccgctcgcggtgggtgccgaaatcagccgctaccgagaccgt
ttcgcgcgactcgcaccgcgggtgagcgaatgggttcgggggcaccacgtcgaagatttc
gcacgcaggactgcgccggtgctggagcggggcgctccggtcgatccgacggaagcggtg
tactaccttctcgtgcagttcgtccttctcgacgtcatcgacgccgcggacatcgtcgag
cgtgacgacgaggaggtcgcggagctgtactacgcactcgacgcgcatctcggtatcgac
cggctgctcagtgcggtgtccgtgctcgaaaagggcgaccgttggcactcgctggcgcgc
ttggcattacgcgacgacctgtacggatcgttgattgccctggtgctcgacgtgttcgcc
ggagcggagccgggtgagacgaccgcggagatgatcgaggactgggaattgtccaacgga
tcacggctcgtgcgcgccagggcggcgctcgacgagattttcgcgtctggaaacctggac
ctcgccatcctgtcggtggcggcacgccagatcagaagcatggtgcgcacgggcgcatcc
gatcggaggtaa
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