Raphidiopsis curvata: NIES932_25960 Help Entry NIES932_25960     CDS       T09812                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rcs  Raphidiopsis curvata Pathway rcs03030   DNA replication rcs03410   Base excision repair rcs03420   Nucleotide excision repair rcs03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rcs00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     NIES932_25960    03410 Base excision repair     NIES932_25960    03420 Nucleotide excision repair     NIES932_25960    03430 Mismatch repair     NIES932_25960  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rcs03032]     NIES932_25960    03400 DNA repair and recombination proteins [BR:rcs03400]     NIES932_25960 Enzymes [BR:rcs01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      NIES932_25960 DNA replication proteins [BR:rcs03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      NIES932_25960 DNA repair and recombination proteins [BR:rcs03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      NIES932_25960    NER (nucleotide excision repair)     GGR (global genome repair) factors      NIES932_25960    MMR (mismatch excision repair)     DNA ligase      NIES932_25960   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       NIES932_25960 BRITE hierarchy Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT BRCT_2 RNA_pol_A_CTD Motif Other DBs NCBI-ProteinID:  BAZ91089 LinkDB All DBs Position 2833941..2836013 Genome browser AA seq 690 aa AA seqDB search MSLIIQVNAQSQRVEELRKLLQQASYAYYVLDSPIMEDTIYDRLYRELQELEKKYPNLVT SDSPTQRVGERPATHFSSVRHNIPLYSLENAFNVEELQSWNQRWIRHLPTPHSLTEVEYV AELKIDGAALALTYQNGVLVRGATRGDGITGEDITPNVRTIRSIPLRLNFEGIEPIEKVE VRGEVFLPLEVFRQINQKRQKAGEQLFANPRNAVAGTLRQLDPRVVAQRQLDFFAYTLHI PGLDDRSIANTQWESLELLQKLGFRVDVNHKLCSSVDEVAQYYQYWNTERLNSPYMTDGV VVKLNAFKLQEQLGFTQKFPRWAIALKYAAEEAPTRVENIMVNVGRTGALTPLAEMRPVQ LAGTTVSRATLHNSDRLQELDIRIGDTVIVRKAGEIIPEVVRVIKELRPDDTEPFIMPTN CPVCGQPVVRELREVVTRCVNASCPAILKGEIEHWVSRDALDIKGIGEKLVHQLVDKGLV HSVADLYDLTEEQLCGLERMGKRSAEKLVQVIRESKNQPWSRVLYGLGIRHVGSVNAQLL SEKFTTVDKLASAKQSDIEGVYGIGVEIAQSVYQWFHISANQNLIIRLETIGIQLATGKS VHTRTEPNSQIAGKTFVITGTLPTLKRDEAKAMIQKAGGKVTDTVSKKTDFIVVGADAGS KLEKAQSLGIKQLDEANLLEMLMIQKTVKS NT seq 2073 nt NT seq  +upstreamnt  +downstreamnt atgagtcttattatccaagttaatgctcaatcacagcgtgtagaagaattaaggaaactc ttacagcaggctagttatgcttactatgttctggattcaccaattatggaggatacaatt tatgacagattatatcgggaattacaagaattagaaaaaaaatatcccaatctggttacc agtgacagtcctacccaacgggtaggggagcgacctgctacccattttagctcagtgcga cacaacattcctctatatagtctggaaaatgcttttaatgttgaggagttacaaagttgg aatcagcgatggattagacatttacctactccacattccttgacggaggtggagtacgta gctgaactgaaaattgatggtgctgctttggctttaacttatcaaaatggggttttggtc agaggtgcaaccaggggtgatggaatcacaggtgaggacattacccccaatgtgagaact attcgctccatacccctacggttaaactttgagggaattgaaccgattgaaaaggtggaa gtgcgaggagaagtgtttttacccttggaagtatttagacagattaatcaaaaaaggcaa aaagctggtgaacagttatttgctaatccccgtaatgctgtagctggtacacttcgacag ttggatcctcgtgtggtggcccagcgtcaactggatttctttgcttataccctacatatt cccggactagatgataggagcattgctaatactcaatgggaatctctggaattattacaa aaactcggatttcgcgttgatgtcaatcataaactctgttcttccgttgatgaagtggct caatattatcagtattggaatacggaaagacttaattccccttacatgaccgatggagtg gtggtaaaattaaatgcctttaaattgcaagagcaattggggtttacacagaaattcccc cgctgggcgatcgctctgaaatatgcagcggaggaagcacctactcgtgtagaaaatatt atggttaatgtgggaagaacaggagcattaacccccttagctgaaatgcgccccgtacag ttagcgggaactacagtatctagagctacgctacataatagcgatcgcctacaggagtta gatattcggattggggacacggtgatagtgcgcaaagctggagaaatcatcccggaggtg gtgagggtaattaaggaactgcgtcctgatgacactgaaccatttattatgcccaccaat tgtccggtatgtggtcaaccggtagtgcgagaattaagggaagtggtcacaagatgcgta aatgcttcctgtccagcaattctcaagggagaaatcgaacattgggttagtcgagatgct ttagatattaagggaataggtgaaaaactagtacatcaattggtggataaaggtctagtg cattccgtagctgatctatatgatctaacagaagagcaattatgtggattagaaagaatg ggcaaaagatctgcagaaaaactggtccaagtaattagggaatcaaaaaatcaaccttgg tctagggtattatatggtttgggtattcgtcacgtaggtagcgtcaatgctcaactactg tccgaaaaatttaccacagtagataaattggccagtgcaaaacaatcagatattgagggt gtatatggcattggtgtagaaattgcccaatccgtgtaccaatggtttcacatcagtgcc aatcaaaatctgattatccgtctggaaactataggtatacaactggccactgggaagtct gttcacactaggactgaacctaattctcaaattgctggtaaaacctttgttattacaggt accttacctacattaaaaagagatgaagcaaaagctatgattcaaaaagctggtggtaag gtcacagacacagtgagcaagaaaactgactttattgttgttggcgcagatgcaggatcc aaattagaaaaagctcaatctctgggaattaaacaactagatgaagctaacctattagaa atgctaatgatccagaaaactgttaaatcatga

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