Ricinus communis (castor bean): 107261922
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Entry
107261922 CDS
T01087
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107261922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
107261922
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107261922
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
107261922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
107261922
NCBI-ProteinID:
XP_015579856
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All DBs
Position
6:19495343..19500461
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AA seq
715 aa
AA seq
DB search
MDTTETISCGENNPKPWQSYHTVYTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEERKE
NYMRQKIENMRAECAKLTPADLSHYQMVADKRILELEDTRDLSRVWVHVDMDAFYAAVET
LSNPLLEGKPMAVGSLSMISTANYEARRFGVRAAMPGFIACKLCPELIFVPTDFKKYTHY
SDLTRKGWLICFLCIFHDANYNHMHILDMHILSFVVFQKYDPHFMAASLDEAYLDITDVC
RERGVTGREIAEELRTGVYQETGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRTAVM
TFISSLPIRKIGGIGKVTEHILRDVLGIKTCQEMLQKGGLLCALFSHSTADFFLSVGLGL
GRTDTPQVKLRKSISSERTFSATDDEALLYRKLADISEMLYSDMQKEGLRGRTLTLKLKT
ASFEVRSRAVTLQKYICSSEDILKYASKLLKAELPISLRLIGLRVSHFNEDKDRAPSDPT
QKTLLNYVVSGDASKKNVGGQSSSDSDCSVQPFMDDMETAFSTDSYEIHHSEIRNPLDCK
IVQDLDNHHCTVSSNFEAEELHKSLSKNAAENVNTTDKVGSNLDETEVPEVKDVDSSLPQ
QLDRSNPDVINKEVIAGSEAQDELVWIDDYKCSFCGIEMPSDFVEERQEHYDFHLAERLQ
KEESSINLRTSTQRQRVVKAARISSQSTRKKHKPSPKESSHLSIDMFFVKSNRNF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggacaccactgaaacgatatcgtgtggagaaaataatccaaagccatggcaatcttat
catactgtctacactaacgctaaagctggaatggagggagtggataaagagaaagtgcaa
agaattgtatatgagatgagcaaaggatcaaagtattttgagaatgaggaaaggaaggaa
aattatatgagacaaaaaattgaaaacatgcgagcggagtgcgcgaagctcacacctgcg
gatttatctcattaccagatggtagctgataaaagaattttagagctagaagatacacgt
gatctttcaagggtttgggtacatgtagatatggatgctttttatgcagctgttgaaaca
ttaagcaatcctttgttagagggaaagccaatggctgttggtagcttgtctatgatctcc
actgctaactacgaggcacggagatttggagttagggctgcaatgccgggttttattgca
tgcaaattatgtccagagttaatttttgttcccacagacttcaagaagtatactcattac
agtgatttaacaagaaaaggttggttgatatgtttcttatgcatatttcatgatgcaaat
tataatcatatgcatatccttgacatgcatatactttcttttgtagttttccagaaatat
gatccccattttatggctgctagtttggatgaagcatatcttgatattactgatgtctgc
agagaaaggggtgttactggtcgagaaattgccgaagagctcagaactggtgtatatcaa
gagactggtctaacatgcagtgctggggtggccccaaatcgcttacttgcgaaggtctgc
tcagatataaataagccaaatggacagtttgtgttaccaaatgatcggacagcagtcatg
acttttatatcctcacttcctatacgaaagattggaggcattggaaaggtcactgaacat
attctgagggatgttttaggaataaaaacatgtcaggagatgctgcagaagggtggactc
ctctgtgcattattttctcactcaacagcagacttttttctctctgtgggactgggactt
gggaggacagatacccctcaagtcaagttacggaaaagtattagtagtgagagaacgttt
tctgctacagatgatgaggcacttctttatcggaaattagctgatatttcggagatgcta
tattctgacatgcaaaaagaaggacttcgtggtcggacattgactctcaaattgaaaact
gcatcctttgaggttcgaagcagagctgtgactttgcaaaaatatatttgttcaagtgaa
gacatattgaaatatgcttcaaagctgctaaaggctgaacttcctatctctttaagactg
ataggcttgagggtgtctcatttcaatgaagacaaggaccgcgctccatctgacccaaca
caaaaaactctcttgaactatgttgtatcaggagatgcatctaagaaaaatgtgggtggt
caaagctcctcagactcagattgtagtgttcagcccttcatggatgacatggaaactgcc
ttttctactgacagctatgaaattcaccattctgaaattagaaatccattagactgcaag
attgtacaggatttggacaatcatcattgcacagtcagcagtaactttgaagccgaggaa
cttcacaaatctttaagcaagaatgctgcagagaatgtaaatactacagataaagtaggg
agtaacttagatgaaactgaagtgccagaagtgaaggatgtagactcttctttgcctcag
cagcttgacaggagtaatccagacgtgataaacaaggaggtcatagctggcagcgaggca
caagatgaattagtttggattgatgactacaaatgttcattctgtggaatcgaaatgcca
tcagattttgtcgaggaaagacaagaacactatgattttcatcttgcggagaggcttcag
aaggaggaatctagcatcaacttgagaacttctacacaaaggcaaagggttgtaaaggcc
gcccgaatctccagccagagcacacgtaagaagcacaaaccatctccaaaagagagcagt
catctttcaattgatatgttctttgtcaaaagcaatcgaaatttctag
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