KEGG   Ricinus communis (castor bean): 8258116
Entry
8258116           CDS       T01087                                 
Name
(RefSeq) putative DNA glycosylase At3g47830 isoform X2
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    8258116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8258116
Enzymes [BR:rcu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     8258116
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     8258116
 Prokaryotic type
     8258116
SSDB
Motif
Pfam: HhH-GPD DUF4672 USP47_C
Other DBs
NCBI-GeneID: 8258116
NCBI-ProteinID: XP_002511456
UniProt: B9RB81
LinkDB
Position
4:26265866..26269302
AA seq 291 aa
MQKNRKRKLKSAETETKSAKINNGNKEEPYPTHPRPTPEECLCIRDSLLAFHGFPQEFAK
YRKQRLGGDDDNKSSDVNSDTAEETVLDGLVKTVLSQNTTEVNSQRAFDNLKSDFPTWQD
VLAAEPKWIENAIRCGGLAPAKASCIKNILNCLLEKKGKICLEYLRDMSVDEIKAELSQF
KGVGPKTVACVLMFHLQQEDFPVDTHVFEIAKALGWVPEVADRNKTYLHLNQRIPNELKF
DLNCLLYTHGKLCRKCIKKRGNQSRKESHDDSCPLLSYCNSSSVKTTDEIN
NT seq 876 nt   +upstreamnt  +downstreamnt
atgcaaaaaaaccgtaaaagaaagctaaaatcagcggaaactgaaaccaaatcagccaaa
atcaataatggtaataaagaagagccgtacccaactcaccctcggcccacgcccgaagaa
tgtctctgcatacgagattctctcttggcttttcacggattccctcaagaatttgctaag
tatcgcaagcagagacttggtggtgatgatgataataagtccagtgatgtgaactcagat
actgcagaagaaaccgttttggatggtttggtgaaaacagtgctttcacaaaatactact
gaggttaattctcaaagagcttttgataatttgaaatctgattttcctacatggcaagat
gttcttgctgctgaaccaaaatggatagagaatgctataagatgtggaggtttagcccca
gcaaaggcttcttgcattaagaacatattaaattgtttgctggagaaaaaaggcaaaatt
tgcctggagtatcttcgagatatgtcagttgatgaaattaaagctgagctctctcaattc
aaaggagttgggcccaaaacggtagcttgtgttttaatgttccatcttcagcaagaggat
ttcccagtggacacacatgtgtttgagatagcaaaggccttaggttgggtccctgaagtg
gctgacaggaataagacataccttcatctcaaccaacggattccaaatgagctgaaattt
gacttgaattgtcttctatacacacatggtaagctttgccgcaaatgcatcaagaaaagg
ggcaaccaaagtagaaaggaatcccacgatgactcctgtcctctattaagttactgcaat
agctctagtgttaagactactgatgaaataaattaa

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