Ricinus communis (castor bean): 8271188
Help
Entry
8271188 CDS
T01087
Name
(RefSeq) tocopherol cyclase, chloroplastic isoform X1
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00130
Ubiquinone and other terpenoid-quinone biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
rcu01240
Biosynthesis of cofactors
Module
rcu_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
8271188
Enzymes [BR:
rcu01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
8271188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
8271188
NCBI-ProteinID:
XP_002516548
UniProt:
B9RS29
LinkDB
All DBs
Position
3:complement(30907131..30912769)
Genome browser
AA seq
505 aa
AA seq
DB search
METNVRCSLHDLHPFSSNLGFRANINPSSTFKPFRCSHFRPLNKAAGAPSSRLSLSNSLT
NSDTSTSAERGRMIESASSVSPLYVPTPSNRQLRTPHSGYHFDGTARKFFEGWYFRVSIP
ERKQSFCFMYAVENPAFRSKMTPLEIAQHGPRSTGVMAQILGADDKYICQCSEESQNFWG
SRHELVLGSTFVPEKGMQPPTKEVPPEEFNKRVSEGFQVTPLWHQGFIRDDGRSDYVETV
KTASWEYSTRPIYGWGDVESKQKSTAGWLAALPVFEPHWQICMAGGLSTGWIEWDGERYE
FQDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGEIALTVGGGLRQLPGLTENFENAALVG
VHYDGNFYEFVPWNGVVNWEVSPWGHWFFTAENETHLVELEATTKDPGTPLLAPTAEVGL
APACRDTCFADLKLQMWERRYDGSKGKLILDVTSDMAAVEVGGGPWFNTWKGKTSTPELL
SRALQVPVDMDEILSFLPLFKPPGL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaacgtccgctgctcactccacgaccttcatccgttctcttcaaatttgggg
tttcgagctaatataaaccctagttccacctttaaaccctttcgctgttctcattttcga
ccgctgaacaaagctgcaggggcgccatcatcaagattatccctttcaaattcgctaact
aacagcgacacttctactagtgctgaaagaggtagaatgattgagagtgcaagttctgtt
agtcccctttatgttcccactcctagcaatcgtcagcttcgaactcctcatagtgggtac
cattttgatgggactgcacggaaattttttgagggttggtacttcagggtctcaattcct
gaaaggaaacagagcttttgtttcatgtatgctgtagagaatccagcatttcgtagcaaa
atgactcctttagaaatcgcacagcatggacctagatcaactggagttatggcccaaatt
cttggtgctgatgataagtatatatgccaatgctccgaagaatctcaaaacttctgggga
agtagacatgaactagtgttggggagtacttttgtacctgagaaagggatgcagcctcca
accaaggaggttcctcctgaggagttcaataaaagagtttcagaaggttttcaagttacc
ccactttggcatcaaggttttattcgtgatgatggcaggtcagattatgtggaaactgtg
aaaactgcaagttgggagtacagcactcgtcctatttatggatggggtgatgttgaatcc
aagcaaaagtccactgcaggctggcttgctgcattacctgtatttgaaccccactggcaa
atatgcatggcaggaggactttcaacaggctggatagagtgggatggtgaaagatatgaa
ttccaagatgcaccttcttactcggaaaagaactggggtggaggcttcccaaggaaatgg
ttttgggttcaatgtaatgtctttgaaggtgcaactggagaaattgctttgactgtaggt
ggtgggctgaggcaattgcctggactgactgagaactttgaaaatgctgcattggttgga
gttcactatgatggaaatttttatgaatttgtcccatggaatggtgttgtaaattgggaa
gtttctccatggggtcactggtttttcactgcagagaatgagacgcatttggttgaattg
gaggcaacaacaaaggatccaggaacgcctttgcttgctccaacagcagaagttggcctt
gctccagcttgcagagatacttgttttgctgatctaaaattgcaaatgtgggaacgaaga
tatgatggctctaaggggaagttaattttggatgttacaagtgacatggcagcagtagaa
gttggaggaggaccgtggtttaacacctggaaagggaagacaagtacaccagagcttctc
agccgtgctcttcaagttccggtagatatggatgagattttgagttttcttccactattc
aaaccccctggcttatag
DBGET
integrated database retrieval system
