Ricinus communis (castor bean): 8278556
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Entry
8278556 CDS
T01087
Name
(RefSeq) uncharacterized protein At4g19900
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rcu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
8278556
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
8278556
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcu01003
]
8278556
Enzymes [BR:
rcu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
8278556
Glycosyltransferases [BR:
rcu01003
]
Glycan extension
P blood group
8278556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
8278556
NCBI-ProteinID:
XP_002519027
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All DBs
Position
5:12923215..12925039
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AA seq
450 aa
AA seq
DB search
MFLISQHYFLFLQHFHNIKKSIFTLLSCLPTSILALILLLLLVYNGSSVFYVRFPLPAKS
SFQSVSLSPENVPGKSLKKLSSSSTVMYAVKEENPPVILKTHLPLLPKSAISMMPINYSL
VSRPKKVHRHRILNKVLRLGDTSKQFSTRIKAFLGSSVCKVRFFMTWISSLESFGDRELL
AIESLFKSNPNACLVIVSSSMDSERGSGLLRPLLDKGFKVASIKPDFNYLFKNTYAESWF
SELKKGNVDPGEVSLGQNLSNLLRLALLYKFGGTYLDTDVIVLKSFGKLRNIIGAQTIDL
ETGNWSRLNNAVLIFDKKHPLLFKFIQEFALTFNGNKWGHNGPYLVSRVVSRVSGRPGFN
FTVLPPSAFYPVNWSRIGSIFRGPRDELHSKWLQRKLEQIKGESLAVHLWNKQSRQIKVE
NGSIINHIILDSCIFCNASSRMRLLKYNNK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgttcttaatatctcaacattactttctctttctacaacatttccataacatcaaaaaa
tcaatctttaccttgctctcttgcttacccacttccattcttgctctaattctgcttctt
cttttggtctacaatggctcctctgtgttctacgtgcgctttccccttcccgccaaatcc
tcctttcagtctgtcagcctctcgccggaaaatgtacccggaaagtcactaaagaagctt
tcttcttcttctacagtgatgtatgcagtgaaagaagagaacccaccagttattttaaag
acccacttgccacttttgccaaagtcggccatttcaatgatgcccattaactattcttta
gtatcgaggcctaagaaagtgcacagacacagaattttaaacaaggttctgcgattggga
gacacgtcaaagcaattctcgacgagaataaaagctttcttggggagttctgtatgtaag
gtgcggttctttatgacttggatttcttctttagagtcatttggtgatagagagttgctt
gctattgagagtttgttcaagtccaatccaaatgcttgtttggttattgtttctagttcc
atggattctgaaagagggagtggtcttttaaggccccttttggataaaggattcaaagtg
gcttcaattaagcctgattttaactatctgttcaaaaacacttatgcagagtcatggttt
agtgaattaaagaaaggtaatgttgatcctggagaggtctctttaggtcaaaacctctct
aatttgcttaggcttgccttgttgtataaattcggtggtacttatttagacactgatgtt
atagtgttgaagagttttggtaaattgagaaatataataggggcacaaacaattgatctt
gaaactgggaattggagcagattgaataatgctgttctgattttcgataagaaacaccct
ttactcttcaagttcattcaagaatttgcactcacatttaatggaaacaagtggggccat
aatggtccttatctagtttcaagggttgtctcaagggtcagcggcaggcctgggttcaat
ttcactgtgttgcctccatctgcattttatccagtgaattggagcagaattggaagcata
ttcagagggcctagagatgagctacattcaaaatggttgcaaagaaagcttgagcagata
aaaggggaaagtttagctgtacacttgtggaacaagcagagtaggcagattaaagttgaa
aatggaagcatcatcaaccatataatactagattcttgtatcttctgtaatgcttcttca
cgcatgagattgttaaaatacaataacaaatga
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