Ricinus communis (castor bean): 8278893
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Entry
8278893 CDS
T01087
Name
(RefSeq) phosphatidate phosphatase PAH2 isoform X1
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00561
Glycerolipid metabolism
rcu00564
Glycerophospholipid metabolism
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
8278893
00564 Glycerophospholipid metabolism
8278893
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8278893
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
8278893
Protein phosphatases and associated proteins [BR:
rcu01009
]
HAD phosphatases
Other HAD phosphatases
8278893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
LNS2_PITM1-3
APP1_cat
HAD_PNKP
DUF4140
SWAP1_C
Motif
Other DBs
NCBI-GeneID:
8278893
NCBI-ProteinID:
XP_015575333
LinkDB
All DBs
Position
2:3068038..3077943
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AA seq
1029 aa
AA seq
DB search
MYAVERLGSYITRGVYTVSGPFHPFGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLKAR
EKVVTISVNGIETNFDMILDPRGEAYFLRELEGEEGDSLSYSSSSGDEMDEQSQKSSRPM
KSKSCDYDVSKSSGDQLDASNGKIVARNNSRRSRISGLIFGRRSVEGDGHLKAGDGTDIA
RISSLERAEIAADLVETFMLDGNGLEEKLVEISEISTNVDEASIQVAHQDDGTKVTCSDS
QIKDTFERCPGKNLDEKETSDEMDVVLPGCSASEEENRSHRVESSLICETSKRLYIASGG
SEEVHLCAQTFHATAEPVVEDTVNKQAENIGLKRRYIESHDIYPQQTFPSSSSLNGHDEA
NIEVPVTISPFTEMICVNPALDSVEIEPKAISSMSSSSNSVDQIQDEVNIGNEITRDDSE
QLNGDCGLTKTSRSPESESSEEEQFFFSDIDDFEPREAQGESDFPDADDNNNHPSSCAEG
TSIIIEPVHMNDESYSPSHKCVQKNGLSDFGNVTENPKLISSPIRIPKHQSVASAEVERL
VESLPNLWSNFDNLDEDDLSCSLSHSLDLNSKSLEWNMQQKNEPQSTNADTGNDTPLQAY
SKDGDTLHSEDNKDGISNPAVEISLCKHLLYEGMGAEAASQAFAAQKLDIDKFTSIGPAV
VKSDKLVVRIGGRYFPWDTAAPIVLGMVAFASENIFEPKGMIPVDQVEKSLVGDPSETIV
TTGGSWRLWPFPFRRSRSRKTTPALNDTRSSDAENVSESNAGVDNSRKVLDGRVSKKMIK
AVTPTSEQLASLNLREGSNEVTFTFSTSVLGRQKVDARIFLWKWNTRIVISDVDGTITKS
DVLGQFMPLVGIDWSQTGVAHLFSAIKDNGYQFLYLSARAIAQAYITRQFLVNFKQDGKA
LPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIRALFPSDCNPFYAGFGNRDTDEI
SYLKVGIPKGKIFIINPKGEVAVNRLVDTRSYTSLHALVHGMFPAMTSSEQEDYNSWNFW
KLPPPDINM
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctgtagagaggctaggaagctacatcacccggggtgtgtacactgtctctggc
ccctttcacccttttggtggagctgtggatattattgtggtggaacaaccagatgggagc
ttcaagtcctctccttggtatgttcggtttgggaaatttcaaggtgttctgaaggcaaga
gagaaggtagttaccatttctgttaatggaattgagacaaactttgacatgattcttgac
ccaagaggagaagcttactttctcagggagttagaaggagaagaaggggactcattatcc
tattcatcatcttcaggtgatgagatggatgagcagtcccagaaaagtagcagaccaatg
aagtccaaaagttgcgattatgatgttagtaaaagttcaggtgatcagcttgatgcaagt
aatgggaagattgtggctaggaataattcccgtcggtcaaggatatctggacttattttt
ggacggaggtcagtggagggggatggtcatctaaaggcaggtgatggtactgacatagcg
aggataagttcattggagcgtgcagagattgcagctgaccttgtcgaaactttcatgtta
gatgggaatggtttggaagaaaaactggtagagatatctgaaatttcaacaaacgttgat
gaagctagtatacaggttgctcaccaagatgatggcaccaaggtcacttgttctgattca
caaattaaagacacgtttgaaagatgtcctgggaagaacttggatgaaaaagagacttct
gatgagatggatgttgtattgccaggttgtagtgcttctgaggaggagaatagatcccat
agggttgaatcttccttaatttgcgagacatccaagagattgtacatagctagtggagga
tctgaggaagtccatttatgtgctcaaacatttcatgcaacagctgaaccagtagttgag
gacacagttaacaagcaagctgagaatattgggctgaagagaagatacattgaatctcat
gatatttatcctcagcaaacatttccatcctcttcttccttaaatggccatgatgaagca
aacattgaagtgccagtaacaatatcaccctttactgaaatgatctgtgttaaccctgca
cttgattcagttgaaatagagccaaaggccattagctccatgtccagttctagcaactca
gttgatcagattcaagatgaggtgaacattgggaatgaaattaccagagacgattcagaa
caacttaatggagattgtggccttacaaaaactagtcgtagtccagaatcggagagttcg
gaggaagaacaattcttcttcagtgatatagatgactttgaacccagagaagctcagggt
gaatcagattttccagatgctgatgataacaacaatcatccttcatcatgtgcagaaggg
actagcataattattgagccagtccatatgaatgatgaatcttattccccttcacataaa
tgtgttcaaaagaatggattgagtgattttggaaacgtgacagaaaatcccaagttaata
tcgagtcccatccgaattcctaaacatcaaagtgttgctagtgcagaagttgagcggctg
gtagaatcattgcccaatttatggtctaactttgataatctggatgaagatgatctcagt
tgttctctgagccattcattagacttgaattctaaatccttggagtggaatatgcaacaa
aagaatgagccacagtctacaaatgcagatacaggaaatgatactccattgcaggcttat
tccaaagacggagatactcttcattcagaagataacaaagatggtatcagcaatcctgct
gttgagatatctctttgcaaacacttattatatgaaggaatgggagctgaagctgcttct
caagcatttgctgctcaaaagctggatatagataaatttacatcgataggccctgcagtt
gtgaagagtgataagcttgttgttagaattggcggccgttacttcccgtgggatacagct
gctcctattgttttaggaatggtagcatttgcaagtgaaaacatatttgaacccaaaggc
atgatacctgttgatcaagttgagaaatctcttgtaggggatccatcggaaaccattgtt
accactggtggaagctggagactttggcctttcccctttagaagatcaagatccaggaag
accacacctgccctaaatgatactagaagttctgatgctgagaatgtttcagagagcaat
gctggggtggataatagtagaaaagtgcttgatggaagggtttccaaaaagatgataaag
gcagttactccaacatctgaacagctggcatccttgaatctgagggaagggagcaatgag
gttacgttcacattctccacgtcagtgctagggaggcagaaggttgatgctagaattttt
ttgtggaaatggaacactcggattgtgatctcagatgttgatgggacaataacaaaatca
gatgttcttggccagttcatgcctttggttgggatagattggtcacaaactggagttgca
catttgttttcagctattaaggataatgggtatcaattcctttatctaagtgctcgtgca
attgctcaagcctatattactagacagttcctagttaactttaagcaggatgggaaggct
ttaccagatggtcctgttgttatttcccctgatggactttttccttctctatttcgtgaa
gtcattagaagggctcctcatgaattcaagattgcctgcctggaggatatcagggcattg
tttccttctgattgcaaccccttctatgctggatttggtaatagagataccgatgagatt
agctacctcaaggttggaattccaaagggaaagattttcattattaatcccaagggtgag
gttgccgtaaaccgcctggttgacacgagatcatacacttcacttcatgctcttgtgcat
ggcatgtttcctgccatgacatcatctgagcaggaggactataattcatggaatttctgg
aaattgccacctcctgatattaatatgtga
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