KEGG   Ricinus communis (castor bean): 8285886
Entry
8285886           CDS       T01087                                 
Name
(RefSeq) DNA repair protein RAD16
  KO
K15083  DNA repair protein RAD16
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8285886
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      8285886
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_2 zf-C3HC4_4 zf-rbx1 RING_XB3-XBAT31 Zn_ribbon_FGT1_2 zf-RING_6
Other DBs
NCBI-GeneID: 8285886
NCBI-ProteinID: XP_002524826
UniProt: B9SFQ7
LinkDB
Position
7:21007032..21015925
AA seq 874 aa
MELRSRKKLPKPLIGNEREETDGNEVEDNKLYTNDGHSDDELYIVSSNDESEEDSVLAST
DADNAESSMKRSMGEAEPDNGQPVVQLPNAPQINIVQERKKRRYSSKRKRNKVILLWKIW
EEENERWIDDHLTEDVDIDHQHGIVTETAEPPAELIMPLLRYQKEWLAWALKQEESSTKG
GILADEMGMGKTIQAIALVLAKREILRQNRESNGATLLPGSSIDPSGIKPTLVVCPVVAV
TQWVKEIDRFTTEGSTKVLVYHGANREKSSKHFLGFDFVITTYSTVEAEFRKYMMPPKDK
CAYCGKSFYENKLATHLKYFCGPDAFRTAKQSKQDRKKLKTSPTEKARSDESPKIQDDVD
VISGRTYRKRHAAMEISEVELALRKEKSVLHSMKWDRIILDEAHYVKDKRCNTAKAIFAL
ESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSFYLCKDCDCRILDYRPSTQCSSCPHSS
VRHFCWWNKYVAKPIQGYGTKDIGKRAMLLLTHKVLRNIVLRRTKKGRAADLALPPRMVM
LRRDTLDVKEEDYYQSLYNESQAQFNTYVQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVY
SKTPPQRGGNLFDTDNEQVCDICHDPAEDPVVTSCSHVFCKACLLDFSASLGRVSCPTCY
SLLTVDLTTKTDAGDQTAKTTIMGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDG
SAKGIVFSQFTSFLDLISYSLHKSGINCVQLVGSMSLPARDNAIKRFSEDPNCKIFLMSL
KAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILQ
LQEKKELVFEGTLGGSSEALGKLTAEDMQFLFIT
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggagctccgctctcgtaaaaaacttcctaaacccttaatcgggaatgagcgagaggaa
actgatggaaatgaagttgaagataataaactttataccaatgacggtcactctgatgac
gaattgtatatagtttcttccaatgacgagagtgaagaagatagtgttctggcttctact
gatgctgataatgcggagtcttccatgaaaagaagtatgggagaagcagagccagataat
ggacaaccggtggttcagttaccaaatgcacctcaaattaatattgttcaagagagaaag
aagcgacgctattcctcaaaaaggaaaaggaataaagttatattattgtggaaaatttgg
gaggaagagaatgaaagatggattgatgatcatctaactgaagacgttgatattgatcat
cagcatggaattgtgactgaaacggctgagccaccggcagagttgataatgcctttgtta
aggtatcaaaaagaatggttagcctgggctttgaaacaggaggagtcatcgaccaagggt
ggaattcttgcagatgagatgggaatgggtaagaccattcaagcaattgcccttgtgctt
gccaagcgagaaatcctccggcaaaaccgtgaatccaatggagctacattgttaccaggt
tcatccattgatccgagtggaatcaaacccacacttgtagtctgtcctgtggttgctgtg
acacagtgggtaaaagaaattgatcgttttactacagaaggaagcaccaaggtgcttgtt
tatcatggggcgaatagagaaaagagttctaaacatttcttaggttttgattttgtaata
acaacatatagtactgttgaggcagaattcagaaaatacatgatgccacctaaggacaaa
tgtgcttactgtgggaagtcattttatgaaaacaagcttgctactcacttgaaatatttt
tgtgggcccgatgcctttagaactgcaaagcagtctaagcaagacaggaaaaagctgaaa
acatcacctacggagaaagcgcgatctgacgagagtcctaaaattcaggatgatgttgat
gtaataagtggtaggacatatcggaaacggcatgcggctatggagatttctgaagtcgaa
ctagccttgcgtaaagagaaatcagttctgcattctatgaagtgggatcgtattattttg
gatgaggctcattatgtgaaagataaacgctgtaatactgcaaaagccatttttgcttta
gaatcttcatataaatgggctctaagtggcactccccttcaaaatcgagttggagaactt
tattctctggtccgctttttgcaaatagtcccatactctttttatttgtgcaaggattgt
gattgccgaatacttgactataggccatcgacgcaatgttcgagctgccctcatagttct
gtaagacatttttgttggtggaataaatatgttgctaaaccaatacaaggttatggaact
aaagatattggaaaaagagcgatgctattgctgacacacaaagttttaagaaacatagtg
ctgagacgtaccaaaaaaggcagggctgctgatcttgctcttccgcctaggatggttatg
ttgaggcgtgatactttggatgttaaagaagaagattattatcagtctttatacaatgaa
agccaggcacaatttaatacatatgtccaggctggaactttgatgaataactatgcacac
atatttgaccttctcactcgtttgcggcaggcagttgatcatccctaccttgtagtatat
tctaaaactccaccacagagaggaggaaacttgtttgatactgataatgagcaagtctgt
gacatttgccatgatccagctgaagatcctgtggttacctcctgttcccatgtcttttgc
aaggcctgtctgcttgatttctctgcttccttgggacgagtctcatgccctacctgttat
agtttacttactgttgatttgacaacaaaaacagatgctggagatcagactgctaaaact
acaattatgggctttaaatcttctagtattcttaacagaatacagttaaatgattttcag
acaagcacaaagatagaggcattgagggaagaaattaggtttatggttgaaagggatggt
tctgcaaaaggaattgtttttagccagtttacatcatttttggatctcataagctactct
ctccataagtctggtataaattgtgttcaattagtgggaagcatgtctttacctgcaaga
gataatgctatcaagagatttagtgaggatccaaattgcaaaatcttcttaatgagtttg
aaagctggaggtgttgctctcaatctgacagtagcatcacatgttttcttgatggatcct
tggtggaatccagctgtggagcggcaagcacaagatagaatacatcgaattgggcagtat
aaaccaatcagaattgtgagattcgttattgagaacacaattgaggagaggattttgcag
ctgcaagagaaaaaggaattagtgtttgaagggactctgggtggcagctcagaggcctta
gggaaattgacagcggaagatatgcaatttctattcatcacttag

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