Ricinus communis (castor bean): 8285886
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Entry
8285886 CDS
T01087
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8285886
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
8285886
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-rbx1
RING_XB3-XBAT31
Zn_ribbon_FGT1_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
8285886
NCBI-ProteinID:
XP_002524826
UniProt:
B9SFQ7
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Position
7:21007032..21015925
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AA seq
874 aa
AA seq
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MELRSRKKLPKPLIGNEREETDGNEVEDNKLYTNDGHSDDELYIVSSNDESEEDSVLAST
DADNAESSMKRSMGEAEPDNGQPVVQLPNAPQINIVQERKKRRYSSKRKRNKVILLWKIW
EEENERWIDDHLTEDVDIDHQHGIVTETAEPPAELIMPLLRYQKEWLAWALKQEESSTKG
GILADEMGMGKTIQAIALVLAKREILRQNRESNGATLLPGSSIDPSGIKPTLVVCPVVAV
TQWVKEIDRFTTEGSTKVLVYHGANREKSSKHFLGFDFVITTYSTVEAEFRKYMMPPKDK
CAYCGKSFYENKLATHLKYFCGPDAFRTAKQSKQDRKKLKTSPTEKARSDESPKIQDDVD
VISGRTYRKRHAAMEISEVELALRKEKSVLHSMKWDRIILDEAHYVKDKRCNTAKAIFAL
ESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSFYLCKDCDCRILDYRPSTQCSSCPHSS
VRHFCWWNKYVAKPIQGYGTKDIGKRAMLLLTHKVLRNIVLRRTKKGRAADLALPPRMVM
LRRDTLDVKEEDYYQSLYNESQAQFNTYVQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVY
SKTPPQRGGNLFDTDNEQVCDICHDPAEDPVVTSCSHVFCKACLLDFSASLGRVSCPTCY
SLLTVDLTTKTDAGDQTAKTTIMGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDG
SAKGIVFSQFTSFLDLISYSLHKSGINCVQLVGSMSLPARDNAIKRFSEDPNCKIFLMSL
KAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILQ
LQEKKELVFEGTLGGSSEALGKLTAEDMQFLFIT
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgctctcgtaaaaaacttcctaaacccttaatcgggaatgagcgagaggaa
actgatggaaatgaagttgaagataataaactttataccaatgacggtcactctgatgac
gaattgtatatagtttcttccaatgacgagagtgaagaagatagtgttctggcttctact
gatgctgataatgcggagtcttccatgaaaagaagtatgggagaagcagagccagataat
ggacaaccggtggttcagttaccaaatgcacctcaaattaatattgttcaagagagaaag
aagcgacgctattcctcaaaaaggaaaaggaataaagttatattattgtggaaaatttgg
gaggaagagaatgaaagatggattgatgatcatctaactgaagacgttgatattgatcat
cagcatggaattgtgactgaaacggctgagccaccggcagagttgataatgcctttgtta
aggtatcaaaaagaatggttagcctgggctttgaaacaggaggagtcatcgaccaagggt
ggaattcttgcagatgagatgggaatgggtaagaccattcaagcaattgcccttgtgctt
gccaagcgagaaatcctccggcaaaaccgtgaatccaatggagctacattgttaccaggt
tcatccattgatccgagtggaatcaaacccacacttgtagtctgtcctgtggttgctgtg
acacagtgggtaaaagaaattgatcgttttactacagaaggaagcaccaaggtgcttgtt
tatcatggggcgaatagagaaaagagttctaaacatttcttaggttttgattttgtaata
acaacatatagtactgttgaggcagaattcagaaaatacatgatgccacctaaggacaaa
tgtgcttactgtgggaagtcattttatgaaaacaagcttgctactcacttgaaatatttt
tgtgggcccgatgcctttagaactgcaaagcagtctaagcaagacaggaaaaagctgaaa
acatcacctacggagaaagcgcgatctgacgagagtcctaaaattcaggatgatgttgat
gtaataagtggtaggacatatcggaaacggcatgcggctatggagatttctgaagtcgaa
ctagccttgcgtaaagagaaatcagttctgcattctatgaagtgggatcgtattattttg
gatgaggctcattatgtgaaagataaacgctgtaatactgcaaaagccatttttgcttta
gaatcttcatataaatgggctctaagtggcactccccttcaaaatcgagttggagaactt
tattctctggtccgctttttgcaaatagtcccatactctttttatttgtgcaaggattgt
gattgccgaatacttgactataggccatcgacgcaatgttcgagctgccctcatagttct
gtaagacatttttgttggtggaataaatatgttgctaaaccaatacaaggttatggaact
aaagatattggaaaaagagcgatgctattgctgacacacaaagttttaagaaacatagtg
ctgagacgtaccaaaaaaggcagggctgctgatcttgctcttccgcctaggatggttatg
ttgaggcgtgatactttggatgttaaagaagaagattattatcagtctttatacaatgaa
agccaggcacaatttaatacatatgtccaggctggaactttgatgaataactatgcacac
atatttgaccttctcactcgtttgcggcaggcagttgatcatccctaccttgtagtatat
tctaaaactccaccacagagaggaggaaacttgtttgatactgataatgagcaagtctgt
gacatttgccatgatccagctgaagatcctgtggttacctcctgttcccatgtcttttgc
aaggcctgtctgcttgatttctctgcttccttgggacgagtctcatgccctacctgttat
agtttacttactgttgatttgacaacaaaaacagatgctggagatcagactgctaaaact
acaattatgggctttaaatcttctagtattcttaacagaatacagttaaatgattttcag
acaagcacaaagatagaggcattgagggaagaaattaggtttatggttgaaagggatggt
tctgcaaaaggaattgtttttagccagtttacatcatttttggatctcataagctactct
ctccataagtctggtataaattgtgttcaattagtgggaagcatgtctttacctgcaaga
gataatgctatcaagagatttagtgaggatccaaattgcaaaatcttcttaatgagtttg
aaagctggaggtgttgctctcaatctgacagtagcatcacatgttttcttgatggatcct
tggtggaatccagctgtggagcggcaagcacaagatagaatacatcgaattgggcagtat
aaaccaatcagaattgtgagattcgttattgagaacacaattgaggagaggattttgcag
ctgcaagagaaaaaggaattagtgtttgaagggactctgggtggcagctcagaggcctta
gggaaattgacagcggaagatatgcaatttctattcatcacttag
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