Ricinus communis (castor bean): 8287384
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Entry
8287384 CDS
T01087
Name
(RefSeq) transcription factor GLABRA 3-like
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8287384
Transcription factors [BR:
rcu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
8287384
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GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_SAC51
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
8287384
NCBI-ProteinID:
XP_048230884
UniProt:
A0ACM4CRN8
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Position
5:25397720..25402290
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AA seq
619 aa
AA seq
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MAQEIVPENLKEQLALAVRSIQWSYAIFWSTSSRQPGVLEWGDGYYNGDIKTRKTVQSVE
LNADQLGLQRSEQLRELYKSLSTGEAGPQARRPTVALSPEDLTDTEWYYLVCMSFVFNIG
QGLPGRTLANGHAIWLQNAQYADSKTFTRSLLAKSASIQTVVCFPFSRGVIELGVTDLVL
EDPNLIQHVKTSFLEIPFPIVATNTSTRSDKDHEILEAKLVPVVGREELDAVSPNDSSDD
QPAEDSFMVEGINGGASQVQSWQLMDDDFSNCVHHSLNSSDCISQTIIDPIKVVPVSNNE
TAHKHCLKDVQECNDTERTALDLRKDDLHYQGVLSSLLKTCHPLILGPCFQNCNKRSSFV
GWKKPRLMHLPKLKSGTSQSLLKKILFQVPRMHVASLLERQEDKGNKVGVLRPEADDIGA
GHETLDRKRKGQISERLMILKSIVPSMSKTDEVSILDDTIEYLQKLGKRVEELESCREFT
ECEARTRRKPQDAIERTSDNYGSSIIGSKQKSLINKRKAYDIDEAEAEIENIMSKEGSAE
NISVNINDKDVVIEIKCPWREGLLLEIIDAASHLKLDSLSVQSSTADGMLSLTIKSKKGY
AALSPGTIKQAIQRVAGKC
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaaatagtgccagagaacctcaaggagcagcttgctcttgctgtgaggagc
attcagtggagttacgcaattttctggtccacttcatctagacaaccaggggtgttggag
tggggcgatgggtactataatggagatataaagacgaggaaaacagttcaatcagtagag
cttaatgcagaccaactgggtttacaaagaagcgagcaattgagagaactttacaagtct
ctttcgacaggcgaagctggtccccaagctaggagacctactgttgcattatctccagaa
gatcttactgatacggaatggtactacttggtttgcatgtctttcgtattcaacattggc
caaggcttgccaggaagaaccttggcaaatggtcacgctatttggctgcaaaatgctcag
tatgctgatagcaaaacattcactcgctctctcctagctaagagtgcatctattcagact
gtagtatgctttccattctcgagaggtgtgattgagctgggcgtgaccgacctggttttg
gaggacccaaatctcattcaacatgttaaaacttcattcttggagataccatttcccatt
gttgctacaaatactagcacaagaagcgacaaagatcacgagattcttgaagccaaatta
gttccagttgtaggacgtgaagaactagatgcagtttccccaaatgacagctctgatgat
cagcctgctgaagattcatttatggtggaagggataaatggaggagcttctcaggtacaa
agctggcaattaatggatgatgacttcagtaattgtgttcatcattccctgaattccagc
gactgtatatctcaaactattatagatcctataaaggttgtccccgtttcgaacaatgaa
acagcacacaagcattgtttgaaagatgttcaagagtgcaatgacactgaacggactgca
ttagaccttcgaaaagacgacttgcactaccaaggtgttctctcgtctcttttaaagact
tgtcatccattaattctaggaccatgtttccagaactgcaacaagaggtccagcttcgtc
ggttggaagaaaccacgacttatgcatcttcccaagttaaaaagtggaacctcgcaaagc
ctattgaagaagattctgtttcaagttcctcggatgcacgtcgccagcttgctcgagcgt
caagaagacaagggcaataaagttggagttctgagaccagaggcagatgatattggtgca
ggccacgaaacattagataggaaacgaaaaggacagataagcgaaagattgatgattctc
aaatctattgtcccttcgatgagtaagactgatgaagtatctatcctagatgacacgata
gaatacctgcaaaagctcggaaaaagggttgaagaattggagtcatgtagagagttcaca
gaatgtgaggcgagaacaagaaggaaacctcaagatgctatagagaggacatctgataac
tatggtagtagtattattggtagcaaacaaaaatcactgataaacaagagaaaggcctat
gacattgatgaagcagaggcagagatagagaatatcatgtcgaaagaaggttcagctgag
aacattagtgtcaatataaatgacaaggatgtagtaattgagataaagtgtccctggagg
gaaggattattgcttgagatcatcgatgcagcaagccatctgaaattagattctctctcg
gttcaatcatccacagctgatgggatgctttctttgactatcaaatctaagaagggatat
gctgcattgtcacctggaacaatcaaacaggccatccaaagagttgctgggaaatgttga
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