Roseobacter denitrificans: RD1_1336
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Entry
RD1_1336 CDS
T00376
Name
(GenBank) aminotransferase, putative
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00270
Cysteine and methionine metabolism
rde00450
Selenocompound metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RD1_1336
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RD1_1336
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rde01007
]
RD1_1336
Enzymes [BR:
rde01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
RD1_1336
Amino acid related enzymes [BR:
rde01007
]
Aminotransferase (transaminase)
Class II
RD1_1336
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GFIT
Motif
Pfam:
Aminotran_1_2
HapK
Motif
Other DBs
NCBI-ProteinID:
ABG30978
RoseoBase:
RD1_1336
UniProt:
Q16AL5
LinkDB
All DBs
Position
complement(1286122..1287294)
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AA seq
390 aa
AA seq
DB search
MSFNDPIERRGTHSSKWDMMETLFDVPQQDGIAMWTADSDYATAPCVIDALRRAADHGVF
GYMPVHDDYLNAIQWWMKTRHNWDIDTSWALTSQGLGNAIALCLDVWTDPGARVVIFTPV
YHEFQIKIEKAGREAVTCPLKHTGDTYVLDLEDAQSRLDGSEQMLIWCSPQNPSGRVWTT
DELRGIAEFAARNDLILVSDEIHHDLVFPDHTFVPMHIAAPEVEDRLIVLTAASKTFNIA
GQRTGNMIIPDAKLRKTMQNRLNTLDYKPAALSLQMITAAYSPEGAKWVDAQIEHLDQNR
RTFDAAIADIPGVISMPLQATYLAWVDFSGTGMSYDEISQRVRKSARIAPSPGPDFGPGG
ETFLRFNLATQHHRIEEACARLKDAFSDLQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaacgatcccatcgaacgccgcggcacgcacagcagcaaatgggacatgatg
gaaaccctctttgatgtcccgcaacaagacgggatcgccatgtggaccgcagacagcgac
tacgcaaccgcgccttgtgtgatcgacgctttgcgccgcgcggcagatcacggtgtcttt
ggctatatgccggtccatgatgactacctgaatgccattcaatggtggatgaaaacacgc
cacaactgggacatcgacacctcatgggcgctgacatcgcaagggttgggcaacgccatc
gcgctctgccttgatgtctggacggaccccggcgcgcgggtggtgattttcacgcccgtc
tatcacgagtttcagatcaagatcgaaaaggcgggacgcgaggcggtgacctgtccgctc
aaacacacaggcgacacctatgtgcttgaccttgaggacgcacaatcacgccttgatggc
tccgaacagatgctgatctggtgctcaccgcaaaacccatcgggccgggtctggacgacg
gacgaattgcgcgggattgcggagtttgctgcgcgcaacgacctgatccttgtgtccgat
gaaatacaccatgatctggtgtttcccgaccatacctttgtgcccatgcacatcgccgcc
cccgaggtcgaggatcgcctgatcgtcctcactgcagcctccaagaccttcaacatcgca
ggccagcgcacgggcaacatgatcatcccggatgcgaaactgcgcaaaacgatgcagaac
cgcctcaatacactggattacaaacccgccgcactgagcctgcaaatgatcaccgccgcc
tattcacccgaaggcgccaaatgggtcgatgcgcagatcgagcaccttgatcagaaccgc
aggacctttgatgcggccatcgccgacatccccggcgtcatctccatgccgctgcaggcg
acctatctggcctgggtcgatttttcaggcacgggcatgagctatgatgagatatcgcag
cgggtgcgaaaatccgcgcgcattgcacccagtcccggaccggacttcggaccgggcggt
gaaaccttcctgcgcttcaacctcgccacgcaacaccaccgcatcgaggaggcctgcgcc
cgcctgaaagacgccttcagcgatctgcaatag
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