Roseobacter denitrificans: RD1_1341
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Entry
RD1_1341 CDS
T00376
Symbol
acrD
Name
(GenBank) acriflavin resistance protein D
KO
K18138
multidrug efflux pump
Organism
rde
Roseobacter denitrificans
Pathway
rde01501
beta-Lactam resistance
rde01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RD1_1341 (acrD)
01503 Cationic antimicrobial peptide (CAMP) resistance
RD1_1341 (acrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_1341 (acrD)
01504 Antimicrobial resistance genes [BR:
rde01504
]
RD1_1341 (acrD)
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_1341 (acrD)
Antimicrobial resistance genes [BR:
rde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RD1_1341 (acrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
ABG30983
RoseoBase:
RD1_1341
UniProt:
Q16AL0
LinkDB
All DBs
Position
complement(1289583..1292747)
Genome browser
AA seq
1054 aa
AA seq
DB search
MDLIRYAIDRPIAVMAAVIMAVLFGTIAVSRIPIQLAPDVRKPIVVIETQWPGAAPSEIE
REIVNPQEEALRGLEGLDIMTSRSRTGEAEITLEFGVGTDMVQSLLLVSNRLDRVGDYPD
EASEPTLDTSGADDSPIAWILLTAQEGNTREMATYGDFVEDVIQDRIERIEGVSAVNVFG
GVTRELQVVVDPRRLSRFDLTVPEVVRVLRDENISLSAGDVEEGKRRYVVRAEGNLNTVE
AIKSVVLRSDIGTGGSGRVRVADVADVSFSFEEANSRLRFRGEPGLAFNIVREPGANVIE
TMAEVKEVLAELSAGPVAEVGLNMRQAYDETVYINGAIDLVTQNIWIGGALAAAVLMAFL
RSPRATLVVSLAIPVSIVSTFVAMAATGRTLNVISLAGIAFAVGMIVDAAIVVLENIYRL
REEGKSRREAAYLGAKQVWGAILVSALTTVLVFVPILIMQLEAGQLFRDIAVAISVSVLL
SLVVAVTVIPALSSKLLSKGDQKKVNIWGLDHLARGFHGMVMSYVRLTVRFRALGLFMVA
LIAGGAAVATITFLPRLEYLPEGNRNLVFGLIIPPPGYNLDTTQTIAERIETVAQPLWEA
APETQTEDGTPTIDNFFFVARPGASFVGASAVDGTQAGALIPVLSQPIFAEPGTFGFMTQ
PSLFGRGVGGGRTIELNISGQDLNDILAVAGRAAGTISQLLPRSEGHQFRPLPGLELGAP
EVRLVPDRLRLADAGLTSSDLALTVDAFNDGLRVAEITVGAERVNLMLKGDPGLQVGQRT
QDIGNYPVVTPSGQIIPVSALADVVVTAGPTEIRHRDRLRTVTLEVRPSDALALEEAVEL
LQEEVIDVLEESGLPNGVRMSVSGTADQLSQTWDAIQINLAVALVIVFLVMAILFESFVL
PLVIMISVPVAAAGGVGGLALLNTFQTQPLDTLTLLGFIILVGIVVNNAILIVHQTLYHL
RDEGMSPVDAIEEATRNRIRPIFMSTLTSVCGMLPLVVFPGEGSELYRGLGAVVVGGLSM
SAFLTLLTVPPLLRLCVRAPIEDEEKLALRTPAQ
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatccgctacgcaattgatcgcccgattgccgtgatggctgccgtcatcatg
gccgttctgttcggcaccatcgccgtcagccgcattccgatccagctggcaccggatgtg
cgcaagcccatcgtcgtgattgaaacgcagtggcccggtgccgccccttccgagattgag
cgcgagatcgtcaacccgcaggaagaggcgctcaggggcctcgaagggctggatatcatg
acctcccgctcccgcaccggagaggcggagatcacactcgaattcggcgtcggcaccgac
atggtgcaatcgctcttgctggtgtcaaaccggttggaccgtgtcggcgattaccctgac
gaggccagcgaacccacactggacacttccggcgcggatgacagccccatcgcgtggatc
ttgttgacagcgcaagagggcaacacccgcgaaatggccacctatggcgatttcgtcgag
gacgtcattcaggaccggatcgaacggatcgagggcgtctcggcggtcaatgtattcggc
ggtgtcacccgcgaattgcaggtcgtggtcgatccgcgcaggctgtcgcgttttgacctc
acggtgcccgaagtcgtgcgcgttctgcgagatgaaaacatctccctctccgcaggggac
gtcgaagaaggcaagcgccgctacgtggtgcgtgccgagggcaacctcaacaccgttgag
gccatcaaatcggtcgtgctgcgctctgacatcggcaccggcgggtcaggtcgcgtgcgg
gtggcggatgtggccgacgtcagcttttcctttgaagaagccaactcgcgtctgcgtttt
cgcggcgagccggggctggcgttcaacatcgtccgtgaacccggcgcgaatgtcatcgaa
accatggccgaggtcaaagaggtgctggccgaactctcggcaggccccgtggcagaggtc
gggctcaacatgcggcaggcctacgacgaaacggtttatatcaacggcgcgattgatctg
gtgacgcagaacatctggatcggcggggcactggccgccgccgtgctgatggcgtttttg
cgcagcccgcgcgccacgctcgttgtgtctctggcgattcccgtcagcatcgtgtccaca
ttcgtcgcgatggccgccaccgggcgcacgctcaacgtcatctcgctcgccgggattgcc
tttgcggtggggatgattgtggatgccgcgattgtggtgctcgaaaacatctaccgattg
cgggaagaaggcaaatcgaggcgcgaggccgcctatctcggcgcgaaacaggtctggggg
gcgatacttgtatccgcactgacgaccgttctggtctttgtcccgatcctcatcatgcag
cttgaagcgggccagttgttccgcgacattgcggtggccatttcggtgtcggttctgctg
tcgcttgtggtcgcggtcacggtgatcccggcgctctccagcaaactgctgtcaaaaggc
gatcagaaaaaggtcaacatctggggtcttgatcaccttgcgcgcggctttcacgggatg
gtcatgtcctatgtgcggctcacggtgcggttccgcgctctggggctgttcatggtggcg
ctcatcgcagggggtgctgcggtggcaacgatcacctttctgccgcgccttgaatatctg
ccagagggcaaccgcaaccttgtctttggcctgatcatcccgccacccggctataacctt
gatacgacgcagaccattgccgagcggatcgaaacagtcgcccaaccgctctgggaagcc
gcgccggaaacgcagaccgaagacggcaccccgacgatcgacaacttctttttcgtggcg
cgcccgggggcaagttttgtcggcgcatccgcagtggatggcacgcaggcgggggcattg
atccccgtcctgtcacaaccgatctttgccgaacccggcaccttcggcttcatgacgcaa
ccgtccctctttggccgcggcgtcggcggggggcgcacgatcgagttgaacatctccggt
caggacctcaacgatattctggcagttgcgggccgcgccgccggtacgatctcgcaactg
ctgccccgttcggaagggcatcagttccgcccgctaccgggccttgaactcggcgcgccc
gaggtgcgtctggtgccggaccggttgcgcctcgcggatgcggggctcacgtcgtcggac
cttgccctgaccgttgatgcgttcaacgacggtctgcgtgtggcagagatcaccgtgggg
gctgaacgcgtcaatctgatgctcaagggtgatcccggcctgcaggtcgggcagcggacg
caggacatcggcaattaccctgttgtcaccccctccggtcagatcatcccggtatccgcc
cttgcggatgtggtcgtcactgccggcccgacagaaatccggcatcgggatcggttgcgc
accgtcacgcttgaggtcagaccttcggacgcgctcgcactggaagaggccgttgaactg
ctgcaggaagaagtcatcgacgttctcgaagaaagcggcctgcccaatggcgtccggatg
agcgtttcaggcaccgccgatcagctcagccagacgtgggacgcgatccagatcaacctc
gccgtggcgctggtcatcgtgttcctcgtcatggcgatcctgttcgaaagcttcgtactg
ccgctggtcatcatgatttcggtgcccgtggccgctgcgggcggtgtcgggggtcttgca
ctgctcaacaccttccagacgcaaccgctggatacgctgacgctgctggggttcatcatc
cttgtcgggatcgtggtcaataatgcgattctgatcgtgcatcagacgctctatcatttg
cgcgacgaaggcatgtccccggtcgacgccatcgaagaggcgacacgcaaccgcattcgc
ccgatcttcatgtccacgctgacgtctgtctgtggcatgctgccgctggtcgtcttcccc
ggcgaaggctctgaactttatcgtggcctcggcgcggtggtggtgggcggtctgtccatg
tcggcgtttctgaccctgctgaccgtgccgcccctgctcaggctttgcgtgcgcgcaccg
atcgaggacgaagagaaactggcgctgcgcaccccggcgcagtga
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