Roseobacter denitrificans: RD1_1608
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Entry
RD1_1608 CDS
T00376
Symbol
sucB
Name
(GenBank) dihydrolipoamide succinyltransferase
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00020
Citrate cycle (TCA cycle)
rde00310
Lysine degradation
rde00380
Tryptophan metabolism
rde00785
Lipoic acid metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
rde01210
2-Oxocarboxylic acid metabolism
Module
rde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD1_1608 (sucB)
09105 Amino acid metabolism
00310 Lysine degradation
RD1_1608 (sucB)
00380 Tryptophan metabolism
RD1_1608 (sucB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RD1_1608 (sucB)
Enzymes [BR:
rde01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
RD1_1608 (sucB)
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Gene cluster
GFIT
Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
GCV_H
Motif
Other DBs
NCBI-ProteinID:
ABG31235
RoseoBase:
RD1_1608
UniProt:
Q169V8
LinkDB
All DBs
Position
complement(1550270..1551766)
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AA seq
498 aa
AA seq
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MTTEVRVPTLGESVTEATVATWFKKPGEAVAVDEMLCELETDKVTVEVPSPMAGTLGEIV
AGEGETVGVNALLATISEGAAAQAPAENSAPTSAAASASVDVMVPTLGESVTEATVSTWF
KAVGDSVAQDEMLCELETDKVSVEVPAPAAGTLSEILAPEGETVAAGGKLAVLSSGDGAT
SAPAAAAATPAPAAPAASGSKDVEDAPSAKKAMAQAGLSPDQVTGTGRDGRIMKEDVSQA
IAAAASAPAPAATAPAPRAPVSADDASREERVKMTRLRQTIAKRLKDSQNTAAMLTTYNE
VDMTEVMALRNEYKDLFLKKHGVKLGFMSFFTKACCHALREVPEVNAEIDGTDIVYKNFV
HMGIAAGTPTGLVVPVIRDADAMSFHAIEQAIAEKGARARDGKLSMAEMQGGTFTISNGG
VYGSLMSSPILNPPQSGILGMHKIQDRPMAINGQVVIRPMMYLALSYDHRIVDGKGAVTF
LVRVKEALEDPRRLLMDL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgaagtacgcgtaccaacattgggcgaatccgtcaccgaggccaccgtcgcc
acctggttcaagaagcctggtgaggctgtggccgtggacgaaatgctctgcgaattggaa
acggataaggtcacggtcgaagtgccctcgcccatggcgggcacattgggtgagatcgtg
gcaggcgaaggcgaaaccgtcggcgtcaatgcgctgcttgcgaccatttccgaaggggcg
gcagcacaggccccggctgagaattccgccccaacatcggctgccgcatccgcctccgtc
gatgtgatggtgccgacgctcggcgagtccgtgaccgaagcaacggtcagcacgtggttc
aaagccgtcggcgacagcgtggcgcaggatgaaatgctctgcgagctggagaccgacaag
gtcagcgtcgaggtccccgcccccgccgccggcaccctgagtgaaatccttgcacccgaa
ggcgagaccgtcgccgcgggaggcaaactggctgtcctgtcttcaggcgatggggccacc
tccgccccggcagcagccgccgccacacctgcccccgcagcgcccgccgcaagcgggagc
aaggacgtcgaagacgccccatccgccaagaaagccatggcgcaggccggtctgagccct
gatcaggtcaccggcacgggccgcgacgggcgcatcatgaaggaagacgtaagtcaggcc
attgctgctgcggcttcggccccagcgcctgcggcgactgcgcccgccccgcgtgcccct
gtctctgccgatgatgcaagccgcgaggagcgggtgaagatgacccgtctgcgccagacc
atcgccaagcgcctcaaggacagtcagaacaccgccgccatgctcaccacctacaacgag
gtcgacatgaccgaggtgatggccctgcgcaacgaatacaaagacctgtttctcaaaaag
cacggggtcaagctggggttcatgtccttctttaccaaggcctgctgccacgccctgcgc
gaggtgcccgaggtcaacgcagagattgatggcacggatatcgtctataagaacttcgtg
catatgggcatcgcggcgggcacgcccacgggccttgtggtgccggtcattcgcgatgcg
gatgccatgtcgttccacgccatcgaacaggcgattgccgaaaaaggcgcgcgcgcgcgc
gacggcaagctgagcatggcggaaatgcagggcgggaccttcacgatctcgaacggcggg
gtttacggctcgctgatgagttccccgatcctgaacccgccgcaatcgggcatcctaggc
atgcataaaattcaggaccgccccatggcgatcaatggccaggtcgtgatccgcccgatg
atgtatctggcgctcagctatgaccaccggatcgtcgacggcaagggtgctgtgaccttc
ctcgtgcgcgtgaaggaagcgctggaagatccacggcgcttgctgatggatttgtga
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