Roseobacter denitrificans: RD1_2534
Help
Entry
RD1_2534 CDS
T00376
Symbol
acrE
Name
(GenBank) RND efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rde
Roseobacter denitrificans
Pathway
rde01501
beta-Lactam resistance
rde01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RD1_2534 (acrE)
01503 Cationic antimicrobial peptide (CAMP) resistance
RD1_2534 (acrE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rde03036
]
RD1_2534 (acrE)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_2534 (acrE)
01504 Antimicrobial resistance genes [BR:
rde01504
]
RD1_2534 (acrE)
Chromosome and associated proteins [BR:
rde03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RD1_2534 (acrE)
Transporters [BR:
rde02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RD1_2534 (acrE)
Antimicrobial resistance genes [BR:
rde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RD1_2534 (acrE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
HH_MFP_RND
YknX_C
BSH_CzcB
BSH_CusB
Biotin_lipoyl
CzcB_C
HH_EMRA
BSH_YknX
HH_AAEA_pHBA
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
ABG32092
RoseoBase:
RD1_2534
UniProt:
Q166K1
LinkDB
All DBs
Position
complement(2423053..2424219)
Genome browser
AA seq
388 aa
AA seq
DB search
MTYRTSLLHTVQRGIILVACLALTIGLSTTSAQSQDGSNPPPKVVIAAAYSEELTREATF
VGRGEASAKTDLIARVTGIITEMVVQDGATVKEGDVIFRIEPDTYQAELQAQQAAVQRAD
ANVKLAEIELVRKTELLRREAIAESELDIAQANAAVAKADLLAAQAALREAELNLERTDI
TAPFDGRIGRSSISLGALVGPSTGPLATLVQESPMYVTFSLSEPQLLGVLERLETGMEEL
IASGASPNVFIRLPDGTMLEEPGTIVFLDNRINPATGTISLRAEFENTRRMILDGGFISV
VIEALEPTLSVLIPQNAVQRDQRGDFVLVVTDQQLVEQRYVVLGPQAETAVVVSEGLREG
ESVIVEGLQRVRPGIEVNAVLTGTSDVN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacatatcggacgtcacttttacataccgtgcagcgcgggatcattcttgtcgcttgc
ctggcgttgaccattggcctttcgacgacaagcgcgcagtctcaagacggctcgaatccc
cccccgaaagtcgtcattgctgctgcctacagcgaagaactgacgcgggaggcgaccttt
gtggggcgaggtgaggcctcggcgaaaaccgatctgattgcacgtgtcacggggatcatc
actgagatggtggtgcaagacggggccactgtcaaagaaggcgatgtgattttccgtatt
gaaccagacacctatcaggccgagttgcaggcgcaacaagctgccgtgcagcgggcggat
gcaaatgtgaaactggcggaaatcgaactggtgcgcaaaacggaactgctcagacgcgag
gcgattgccgaatccgaacttgatatcgcacaggcgaacgccgctgtggccaaggcggat
ctgctggcagcacaggcggccttgcgcgaagccgagttgaaccttgagcgcaccgacatc
accgcgccgtttgacggacgcattggccgctcaagcatcagccttggcgctttggtgggg
ccgtcaacggggccgctcgcgacgctggtgcaggaatcgccgatgtatgtcacgttttcc
ctgtcagaaccgcagctgctcggcgtgcttgagcgtctggaaaccggcatggaagaattg
atcgccagcggggcctcgcccaatgtcttcatccggcttcccgacgggactatgctggag
gaaccgggcacaatcgtttttctggacaaccggatcaatcccgcaaccggcaccatctcg
ctgcgggcagagtttgagaatacccgccgcatgatccttgacggggggttcatctcagtc
gtcatcgaagcgctggagccgacattaagcgttctgattccgcaaaatgcggtgcagcgc
gaccagcgcggtgatttcgttctggtcgtgacggaccaacagcttgttgagcaaagatat
gtggtgctgggcccgcaggcagaaaccgccgtcgttgtctccgaggggctgcgcgagggt
gaaagtgtgatcgtggagggcttgcagcgcgtgcgccccggtatcgaggtcaacgccgtt
ttgaccggcacaagcgatgtgaactga
DBGET
integrated database retrieval system
