KEGG   Roseobacter denitrificans: RD1_2792
Entry
RD1_2792          CDS       T00376                                 
Symbol
dksA
Name
(GenBank) dnaK suppressor protein
  KO
K06204  RNA polymerase-binding transcription factor
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    RD1_2792 (dksA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rde03000]
    RD1_2792 (dksA)
   03021 Transcription machinery [BR:rde03021]
    RD1_2792 (dksA)
   03009 Ribosome biogenesis [BR:rde03009]
    RD1_2792 (dksA)
Transcription factors [BR:rde03000]
 Prokaryotic type
  Other transcription factors
   Others
    RD1_2792 (dksA)
Transcription machinery [BR:rde03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     RD1_2792 (dksA)
Ribosome biogenesis [BR:rde03009]
 Prokaryotic type
  rRNA transcription factors
   RD1_2792 (dksA)
SSDB
Motif
Pfam: DksA_N zf-dskA_traR DUF2093 FAM193_C
Other DBs
NCBI-ProteinID: ABG32322
RoseoBase: RD1_2792
UniProt: Q165M1
LinkDB
Position
complement(2660735..2661157)
AA seq 140 aa
MKQEVFLPDDYRPAEDEPFMNERQVEYFRRKLLNWRAELLAGSKDTIEGLQDGTRNIPDV
ADRASEETDRALELRTRDRQRKLVSKIDGALRRIDEGEFGYCSVTGEPISLKRLDARPIA
TMSLEAQERHERREKVHRDD
NT seq 423 nt   +upstreamnt  +downstreamnt
atgaaacaagaagtgtttttaccggatgattaccgtccggccgaagacgagccattcatg
aatgaacggcaggttgagtatttcagacgtaaactgctgaactggcgggccgagcttttg
gcgggcagcaaggacacgattgaagggcttcaggacggcacgcgtaacattcccgatgtt
gccgaccgcgcgtccgaagaaacagaccgcgcgctggaattgcgcacacgcgaccgccag
cgcaaattggtcagcaagatcgatggcgcgctgcgtcgcattgatgagggcgagttcgga
tactgctcagtcacgggcgagccgatctctttgaagcggttggatgcgcgtccgattgcg
accatgagccttgaggcgcaggaacgtcatgagcgccgcgagaaagtgcatcgcgacgat
tga

DBGET integrated database retrieval system