Roseobacter denitrificans: RD1_3365
Help
Entry
RD1_3365 CDS
T00376
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00300
Lysine biosynthesis
rde00550
Peptidoglycan biosynthesis
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RD1_3365 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RD1_3365 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
RD1_3365 (murE)
Enzymes [BR:
rde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RD1_3365 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
Precursor biosynthesis
Amino acid ligase
RD1_3365 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ABG32860
RoseoBase:
RD1_3365
UniProt:
Q163I3
LinkDB
All DBs
Position
complement(3229481..3230962)
Genome browser
AA seq
493 aa
AA seq
DB search
MLGQTKTLFQLGLTARNGRQATLTGLAVDSREVRDGYLFAALPGSRIHGAEFIQYALRMG
ASAILTDAAGAQLAATELGASEAALVISDDPREALARTAALWFGGQPKTMVAVTGTNGKT
SVATFVRQIWTLLGHEAINLGTTGVEGAWSAPLAHTTPEPITLHRALAEAARQGVTHAAM
EASSHGLDQRRLDGVTLAAAGFTNFTQDHLDYHATFEDYFAAKAGLFARVLPEDATAVIN
IDADRGVDMAAIAEARNCPVITVGRDSGDLHLGNIQVDSTGQVVCFMHHGTQYVRRLGLI
GSFQAENVMLAAALVIACGEDPQHVFDTLEHLSTVRGRMQLAGTRDNGATVFVDYAHTPD
AIATALKALRPHVVGRLIAIVGAGGDRDATKRPLMGQAAAENADVVFVTDDNPRSEDPAS
IRAAVLLGAPDAIEVGDRAEAILRGVDALGPGDALLIAGKGHETGQVVGDDVLPFDDAEQ
ASVAVAALDGRLA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggcagacgaaaacactattccaactgggtctcaccgcgcgcaacgggcggcag
gcgacgctgacggggcttgcggttgacagccgcgaggtcagggatggctatctttttgcc
gccctgccgggatcaaggattcacggagctgaatttattcaatacgccttgcgcatgggt
gcgtcggccattctgacggatgctgcgggcgcgcaattggcagcgaccgaactgggcgca
agcgaggcggcgctcgtgatatcggacgatccgcgagaggctctggcgcgcaccgccgcc
ctgtggtttggcggccagcccaagaccatggtggccgtgacggggacgaacggaaagaca
tccgtcgcgaccttcgtgcgccaaatctggacgctgctggggcatgaggcgatcaacctg
ggcacaaccggtgttgaaggcgcatggagcgccccgctggcccataccacgccggaaccg
atcacgctgcaccgtgcgctggctgaggccgcgcgtcagggtgtgacccatgcggcgatg
gaggcttcaagccacgggcttgaccagcgcaggctggacggtgtgacgctggccgctgcc
gggttcacgaatttcacgcaggaccatctggattaccacgccactttcgaggattacttt
gccgccaaggcggggctgtttgcgcgcgtgctgcccgaagacgccacagccgtgatcaac
atcgacgcggatcggggcgtcgatatggccgcgattgccgaggcgcgcaattgtcccgtg
atcaccgtcgggcgggacagtggcgatctgcatctgggcaatatccaggtggattcgacc
ggtcaggtggtatgcttcatgcatcatggcacgcaatatgtgcgccgcctcgggttaatt
ggcagctttcaggccgaaaacgtgatgctggcggcggctttggtgatcgcctgcggggaa
gacccgcagcatgtatttgatacgctggagcatctgagcaccgtgcggggccgtatgcag
cttgcgggcacgcgcgacaatggggccacggtctttgtcgattatgcccatacgccagat
gcgattgccacggcactcaaggcgctgcgaccgcatgttgtcggtcgtctgatcgccatt
gtcggcgcaggcggggaccgggatgcgaccaaacgccccctgatggggcaggcggctgcg
gaaaacgcggatgtggtatttgtgacagacgacaatccgcgctccgaggatccggcaagc
atccgcgcggcggttttgctcggtgcgcctgatgcgatcgaagtcggcgaccgggcggag
gcgatcctgcgcggggtcgacgcgctggggcccggggatgccttgttgatcgcgggcaaa
gggcatgaaaccgggcaggtggtgggtgatgatgtgctgccctttgatgatgcggaacag
gcaagcgtggcggttgccgcgctggacgggaggctggcatga
DBGET
integrated database retrieval system
