Roseobacter denitrificans: RD1_3980
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Entry
RD1_3980 CDS
T00376
Symbol
cdd
Name
(GenBank) cytidine deaminase
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00240
Pyrimidine metabolism
rde01100
Metabolic pathways
rde01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RD1_3980 (cdd)
Enzymes [BR:
rde01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
RD1_3980 (cdd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
dCMP_cyt_deam_2
DUF3280
SNAD4
MTTB
Motif
Other DBs
NCBI-ProteinID:
ABG33433
RoseoBase:
RD1_3980
UniProt:
Q161B0
LinkDB
All DBs
Position
complement(3838984..3839373)
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AA seq
129 aa
AA seq
DB search
MSLKDAATAVRENAHVPYSNFKVGAALRGASGAVYVGCNVENVAYPEGTCAEAGAIAAMV
AAGETVITEAYVIAGSPMPVSPCGGCRQKLAEFAGADVPVTMATTSGIEQKTTVGALLPG
VFNTEHMSL
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaaagatgcagcaacagccgtgcgggaaaatgcccatgttccctattccaat
ttcaaggtcggggcggctttgcgcggtgcatccggcgcggtctacgtgggctgcaacgtg
gaaaacgtggcctacccggaaggcacctgcgccgaagcgggtgcaatcgcggccatggtg
gcagcgggggagacggtgatcaccgaagcctatgtgatcgccggatcgcccatgccggtc
agcccctgtggcggctgtcggcaaaaacttgcggaatttgccggggccgatgtgcctgtg
acgatggccacgacatccggtattgaacagaaaacgaccgtgggtgcgcttttgcccggg
gtgttcaacactgaacatatgagcctttag
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