Rhizorhabdus dicambivorans: CMV14_21170
Help
Entry
CMV14_21170 CDS
T05084
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi00300
Lysine biosynthesis
rdi00550
Peptidoglycan biosynthesis
rdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CMV14_21170
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMV14_21170
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rdi01011
]
CMV14_21170
Enzymes [BR:
rdi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CMV14_21170
Peptidoglycan biosynthesis and degradation proteins [BR:
rdi01011
]
Precursor biosynthesis
Amino acid ligase
CMV14_21170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
fvmYukDl_N
Motif
Other DBs
NCBI-ProteinID:
ATE67489
UniProt:
A0A2A4G1M9
LinkDB
All DBs
Position
4505157..4506584
Genome browser
AA seq
475 aa
AA seq
DB search
MRLTDLLPDLASAAGDARITGFAIDHRKVAPGTVFGAFKGARFNGEDFIAQAVADGAIAV
VSAPGVSVEGAAHVADAEPRRLFARLAARYFAPFPETTVAVTGTNGKTSTVELTRQLWRM
AGFHAASIGTLGVTTADEQVSTGLTTPDIVTFLSNMAGLRKEGVSHAAFEASSHGLSQYR
TEGLPVRAAAFTNLSRDHLDYHGTMDAYFAAKLRLFTEVVDQDGAAVIWADDPRSEEVIA
AVRARGVGLLSVGTKGETIRLVERTPTALGQTLKLEVDGKTREVKLPLIGAYQAANALVS
AGLVIATGGEIDLTLANLQRVAPVRGRLERAAITKTGAPVYVDYAHTPDGLEAAITALRP
HTEGRLITLFGAGGDRDTGKRPLMGEVATRLSDRTIVTDDNPRSEDPALIRRDVMAGAPG
ATEIGGRREAIAAAIAEARAGDVVLIAGKGHEQGQIIGDRVLPFDDVTVARECAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgactgacctcctgcccgacctcgcttccgcagccggtgatgcccgcatcacc
ggcttcgccattgaccaccgcaaggtggcgccgggcacggtgttcggcgcgttcaaaggc
gcgcgtttcaacggagaggatttcatcgcccaggcggtggccgacggcgcgatcgcggtg
gtctccgcgcccggcgtgtcggtggagggcgcggcccatgtcgccgatgccgagccgcgc
cgcctcttcgcccggctggcggcgcgctatttcgcgcccttccccgagacgaccgtcgcc
gtcaccggcaccaacggcaagacctcaaccgtcgagctgacccgccagctgtggcggatg
gcggggttccacgccgcctcgatcggcacgctgggcgtcaccaccgccgacgagcaggtc
tcgaccgggctgaccacgcccgacatcgtcaccttcctgtcgaacatggcgggcctgcgg
aaggaaggcgtaagccatgccgccttcgaggcatcgagccacggcctgtcgcaatatcgt
accgagggcctgccggtgcgcgcggcggccttcaccaatctcagccgcgaccatctcgac
tatcacggcacgatggacgcctatttcgcggccaagctgcgcctgttcacggaggtggtg
gaccaggacggcgccgccgtcatctgggcggacgatccccggtcggaggaggtgatcgcc
gccgtgcgggcccgtggcgtcgggttgctcagcgtcggcaccaagggcgagacgatcagg
ctggtcgaacggacccccaccgcgctcggccagaccctgaagctggaggtggacggcaag
acccgcgaggtgaagctgccgctgatcggcgcctatcaggccgccaacgcgctggtttcc
gccggcctcgtcatcgcgaccggcggggagatcgacctgacccttgccaacctccagcgt
gtcgcccccgtgcgagggcggctggagcgggcggcgatcacgaagacgggcgcgccggtc
tatgtcgactacgcccacacccccgacgggctcgaagccgcgatcacggcgctgcgcccg
cacaccgaggggcggctgatcaccctgttcggcgcgggcggcgaccgcgacaccggcaag
cgcccgctgatgggcgaggtcgcgacccggctatccgaccgcacgatcgtcaccgacgac
aatccgcgcagcgaggacccggcactgatccgccgcgacgtgatggccggcgcgcccggc
gccaccgagatcggcggccgccgcgaggcgatcgccgccgccatcgccgaagcccgggcg
ggggacgtcgtgctgatcgcgggcaagggccatgaacagggccagatcatcggcgaccgg
gtgctgccgttcgacgacgtcacggtggcgcgggagtgcgcggcgtga
DBGET
integrated database retrieval system
