Roseateles depolymerans: RD2015_1467
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Entry
RD2015_1467 CDS
T04166
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00020
Citrate cycle (TCA cycle)
rdp00785
Lipoic acid metabolism
rdp01100
Metabolic pathways
rdp01110
Biosynthesis of secondary metabolites
rdp01120
Microbial metabolism in diverse environments
rdp01200
Carbon metabolism
rdp01210
2-Oxocarboxylic acid metabolism
Module
rdp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rdp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD2015_1467
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RD2015_1467
Enzymes [BR:
rdp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RD2015_1467
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ALV05952
UniProt:
A0A0U3NBR7
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Position
1713808..1716810
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AA seq
1000 aa
AA seq
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MSVNRLSVGPVWAPARRCDRDADTGAGVAQAHAHAHAPQLRPGVAAFIETYRWHGHRFAR
LDPLAPQEAPDGDGSAWSVGSGDGPTLAQFGLSDDTALSEDQRPVLGATKAKDLHQRLRH
WYCGTVALDVTAVRDEQRRAWLYQQFETEDATGAFADRVAADRRQTGPSAERAAAAESPK
LEGDAHSSESAEPSLVAERAEHLLRRLAQVEGWERFLSRRYPHGKRFSLEGHEALIPLLE
AVLARAASQGISRCVMGMPHRGRVNVLANLLGHPVDEIMDFFEPQPAHPERQKDLVYHLG
GRYDVSTPHGAMAVTLASNPSHLQSVYPVVVGMARGSNLQHGAGRSLAAAQALSAGRLPA
QRCLPVMMHGDAAFAGQGVVMETLALGLKTGYEVGGVIHIIINNQVGFTEPNRMDPEQSR
FCTDVTRTVDAPVLRVSASDPEAVLRVAAMAVDYRARFGTDVVIDLVGFRRLGHSEHDEP
MLTAPRLYAQMPEQPGVATRYAHRLVARGVLTDAAAHAALQALEVFDPAVLRAPGHPMPG
AKASTAVQEAPQAQRARRGDEGMQTQGAPADIGSAPRSLAGIPWPASLPAPQAAAPVGTM
PDADALRWVLANLADVPTAFEPHPLLARLAARWQRLAVGELTPQGRPEAIDWCTAESIAH
ALTLSAGVPLRISGLDVQRGTFMHRHAVWHNQSASGPAQWMPLSHFTAKASLEVHNSILS
EEAVLGFEYGHSVAAPSAMTVWEAQFGDFVNGAQVFLDQYLSCGEEKWGSVSGLTVLLPH
GYEGVGPEHSNAFLTRILLLCGADNLRVAMPSTAAQWALLLLQQALDPVKKPLVVMTPKA
VLLGEPRSHTTLEALAGARFQPVIDDEAAVRAQVQRVLVCSGKVYYDLLSARASLPVSEA
REVALVRVERLYPFPSDELADVLKGYPAATSLVWVQEETRNQGAWPVVRDELQALVSGSE
RLRLSEVSRPVTAAGATASAVVHGEQQRALVGRALGGICS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaaccgcctttccgtcgggcccgtgtgggcgccggcacgtcgttgtgatcgc
gatgccgacactggtgcgggcgtggcgcaggcccacgcccacgcccacgctccgcaactg
cggccgggtgtggccgcatttatcgagacttatcgctggcacgggcatcgtttcgcccgg
ctggatcccctggctccgcaggaggcaccggatggggacggctccgcgtggtccgtcggg
tcgggcgatgggccgacgctggcccagttcggcctgagcgatgacacggcgctgagcgag
gaccagcgtccggtgctgggcgccacaaaggccaaggacctgcaccagcgtctgcggcat
tggtactgcggcacggtggcgctggacgtcacagcggtgcgcgatgaacagcgacgcgcc
tggctgtatcagcagttcgagacggaggatgccacgggcgcgttcgctgaccgagtagcg
gcggatcgacgccagacgggcccgagtgctgaacgcgctgcagcggcggaatcgcccaag
ttggagggggacgctcattccagtgagtccgccgagccctccctggttgctgagcgtgct
gaacatctcctccggcgcctcgcgcaggtggaagggtgggagcgcttcctgtcgcggcgc
tacccccatggcaagcgcttctcgctggaggggcatgaggccttgattccactgctggag
gcggtgctggcgagggcggcgtcacagggcatctcccgctgcgtcatgggcatgccgcat
cggggccgggtcaatgtgctggccaacctgctggggcatccggtggacgagatcatggat
ttcttcgagccgcagccggcgcatccggagcggcagaaggacctggtctatcacctcggc
ggacgctacgacgtgagcaccccgcacggggcgatggcggtcaccctggccagcaatcca
tcgcacctgcaaagcgtctatccggtggtggtgggcatggcgcgcggcagcaatctccag
cacggcgcggggcgaagccttgcggctgctcaggcgctgagcgcaggtcgccttccggcg
cagcgctgcctgccggtgatgatgcacggagatgccgccttcgccgggcagggggtggtg
atggagacgctggccctgggcctcaagacggggtatgaggtgggcggcgtcatccacatc
atcatcaacaaccaggtgggcttcaccgagcccaaccgcatggacccggagcagtcacgc
ttctgcaccgatgtgacccgcacggtggatgcaccggtgctgcgggtgagtgccagcgac
ccggaggccgtgctgcgcgtggcggcgatggcggtggactatcgcgcccgcttcgggacg
gacgtggtcatcgacctggtcggcttccggcggctggggcattccgagcatgatgaaccg
atgctgaccgcgccccggttgtatgcgcagatgccggagcaaccgggtgtcgcgacccgc
tatgcacacaggctggtcgcgcgaggggtcctgactgacgccgctgcccatgcggccttg
caggcgctggaggtgttcgatccagcggtgctgcgggcgccgggacatccgatgcctggc
gccaaggcgtccacagcagtgcaggaagcgccgcaagcgcagcgcgccaggcgcggcgat
gagggcatgcagacccagggggcgcctgcggacatcgggagcgcgccgcgatcgctggcg
ggcattccatggcccgcgtccctgcctgcgccccaggccgccgcgcctgttggcaccatg
ccggacgcggatgcgctgcgctgggtgctggccaacctggccgatgtgccgacagccttc
gagccgcatccgttgttggcccgtctcgccgcacgatggcagcggctcgcggtgggtgaa
ctcaccccgcaagggcgacccgaggccatcgactggtgcacggccgaatcgatcgcgcat
gcgctgacgctgtcggcgggcgtgccactgcgcatctccggcctggatgttcagcggggc
accttcatgcatcggcatgcggtgtggcacaaccagtcggcatcgggcccggcccaatgg
atgccgttgtctcacttcacggcgaaggcgtcactggaggtgcacaactccatcctgtcg
gaggaggcggtgttgggctttgagtatgggcacagcgtcgcagcgccgtcggcgatgacg
gtgtgggaagcccagtttggcgacttcgtgaatggggcacaggtcttcctggatcaatat
ctcagctgtggagaggagaagtggggatctgtgagcgggttgacggtgctgctgccgcat
gggtatgaaggcgttgggccggaacattccaatgccttcctgacgcgcatcctgctgctg
tgcggtgcggacaacctgcgcgtggcgatgccgtccaccgcggcgcagtgggcgttgctg
ctgcttcagcaggcgctggatccggtgaagaagccgctggtggtgatgacgcccaaggcg
gtcctgctgggcgagccgcgcagccacacgacgctggaagcgctggccggggcacggttc
cagccggtgatcgatgatgaggcggcggtgcgggcccaggtgcagcgggtgctggtgtgc
agcggcaaggtttattacgaccttctgtcggcacgcgcatcgctgcccgtgagtgaggcg
cgggaggtggcgctggtcagggtggagcggctgtatccgtttccgtcggacgagctggcg
gatgtgttgaagggatatccggcggcgacgtccttggtgtgggtgcaggaggagacccgc
aatcagggcgcctggccggtggtgcgggatgagctgcaggcgctggtgagcgggtcggag
cggctgaggctgagcgaggtgtcaaggccggtgacggcggcgggggcgacggcttcggcg
gtggtgcatggggagcagcagagggcgctggtggggagggcgcttggggggatctgctct
tga
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