Rhodococcus erythropolis BG43: XU06_11365 Help Entry XU06_11365        CDS       T03842                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism reb  Rhodococcus erythropolis BG43 Pathway reb03030   DNA replication reb03410   Base excision repair reb03420   Nucleotide excision repair reb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:reb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     XU06_11365    03410 Base excision repair     XU06_11365    03420 Nucleotide excision repair     XU06_11365    03430 Mismatch repair     XU06_11365  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:reb03032]     XU06_11365    03400 DNA repair and recombination proteins [BR:reb03400]     XU06_11365 Enzymes [BR:reb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      XU06_11365 DNA replication proteins [BR:reb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      XU06_11365 DNA repair and recombination proteins [BR:reb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      XU06_11365    NER (nucleotide excision repair)     GGR (global genome repair) factors      XU06_11365    MMR (mismatch excision repair)     DNA ligase      XU06_11365   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       XU06_11365 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 HHH PTCB-BRCT Nlig-Ia HHH_3 UPF0758_N Motif Other DBs NCBI-ProteinID:  AKD97274 LinkDB All DBs Position 2464151..2466253 Genome browser AA seq 700 aa AA seqDB search MTETADAMQPAPNEAREQWTELAEEVRQHQFRYYVRDAPVISDGAFDTLLGQLNALEERY PDLRTPDSPTQLVGGGFATDFTSVDHLERMLSLDNVFDESELRGWIAKVEQETGPELHYL CEVKIDGVALNLVYENGKLVRAATRGDGRTGELVTLNALTINDIPERLTATDEYPIPTLL EVRGEVFFRLEDFAALNASLVEEGKAPFANPRNSAAGSLRQKNPAVTARRRLGMICHGFG RMEGFEPASQYDAYVALAAWGLPVSTHTSRVVGADAVVEKMKYWGEHRHDVEHEIDGLVV KVDEMSLHRRLGTTSRAPRWAIAYKYPPEEVTTKLLDIRVSVGRTGRVTPFAYMEPVTVA GSTVSLATLHNGSEVKRKGVLIGDTVVLRKAGDVIPEVLGPVADVRDGTEREFVMPTHCP ECGTLLAPAKEGDVDVRCPNQQHCPAQLRERVFHVSGRGAFDIEVLGYEAATGLLEAKVI GDEGDLFSLDAEKLIEVPIFRTNAGALSANGKRLLANLDSAKDKPLWRVLVALSIRHVGP TAARALAGEFGSLQRIREASVDELAAVDGVGSTIAAAVVEWFSVDWHQQIVDKWASAGVR MEDERDDSIPRNLEGLSIVVTGSLETYSRDQAKEAILVRGGKAAGSVSKKTAFVVVGEAP GSKHDKAVELGVPVLDEDGFRRLLEDGPDAVAPTDLDESE NT seq 2103 nt NT seq  +upstreamnt  +downstreamnt gtgactgaaaccgcggatgcaatgcagccagcgcccaacgaggcgcgcgagcagtggacg gagctggccgaagaggtacgccagcatcagttccgctactacgttcgtgacgcgcccgtc atttcggacggtgcattcgacacattgctcgggcagctcaatgctctcgaagagcggtac ccggatctgcgaactcccgactctccgacgcaactcgtcggcggcggattcgcgacggac ttcacgtccgtcgatcacctcgagcggatgctcagcctcgacaacgtcttcgacgagtcc gaactccgcggatggatcgccaaggtagagcaggaaaccgggccggaactgcactatctc tgcgaagtgaaaatcgacggtgtcgcgctcaatctcgtctacgagaacggcaagctcgtg cgtgccgcaacccgcggggacggtcgtacgggcgagctggtcactctcaatgccctgacg atcaacgacatcccggagcggctcaccgccacggacgaatacccgattccaaccttgctc gaggtgcgaggagaggtgttcttccgcctcgaggacttcgcggcactcaatgcctccctc gtggaggagggtaaggcgccgttcgccaatccgcgcaactctgcggcgggctccctgcgt cagaagaatcctgccgtcaccgcgcgtcgtcgcctcggcatgatctgccacgggttcggg cgaatggaaggtttcgagccggcttcgcagtacgacgcctacgtggccctcgccgcctgg gggctgccggtgtccacgcacacctcgcgggtggttggcgccgacgccgtggtcgaaaag atgaagtactggggagaacatcgccacgacgtcgagcacgagatcgacgggttggtggtc aaggtcgacgagatgtcgttgcatcgacgtctgggcaccacgtcccgcgcaccacggtgg gcgatcgcgtacaagtacccgccggaagaggtcacgaccaagctcctcgacatccgggtc agtgtcggccgcacgggtcgcgtgacgccgttcgcgtacatggaacccgtcacggtcgcg ggttccactgtgtccttggccaccctccacaacggctcggaggtcaagcgcaagggtgtg ctgatcggcgacaccgtggtgttgcgcaaggctggagatgtcatccccgaggttctcggt cccgtggcagacgttcgtgacggtaccgagcgcgagttcgtcatgccgacgcattgcccc gagtgcggcacgttgttggcacccgcgaaagagggcgacgtcgacgtgcgatgccctaat cagcaacactgcccggcgcagttgcgcgagcgtgtgttccacgtctcggggcgcggagca ttcgacatcgaggtgctcggttacgaggccgcgaccggactgctggaggcgaaggtcatc ggtgacgagggagacctcttctcactcgacgccgagaaactgatcgaggttccgatcttc cgcaccaatgcgggagcgctgtctgccaacggaaaacgcttgctggccaacctggattcg gccaaggacaagccgctgtggagagtgcttgtggcactgtcgattcggcacgtcggcccc actgccgcgagggcgttggccggcgaattcggttcgctgcaacgtattcgggaagcgtcg gtcgacgagttggctgcagtcgacggtgtcggatccacgatcgccgccgctgtcgtggag tggttctccgtcgactggcatcagcagatcgtcgacaagtgggcttcggccggggtgcgc atggaggacgagcgagacgactcgattccgcgcaatctcgagggtctctcgatcgtcgtc accggttcgctcgagacgtactcgcgagatcaggcgaaggaagcgattctggtgcgcggc ggtaaggcggctgggtcggtctcgaagaagactgcgtttgtcgtcgtcggtgaagcgccc ggttccaagcatgacaaggcagtcgaattgggtgtgccggtgctcgacgaagacggcttc cggcggttgctcgaagatggcccggatgcggtcgctcccaccgatttggacgaatcagag tga

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