Rhizobium etli CIAT 652: RHECIAT_CH0002990
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Entry
RHECIAT_CH0002990 CDS
T00720
Symbol
lpxC
Name
(GenBank) UDP-3-0-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase protein
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec00540
Lipopolysaccharide biosynthesis
rec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RHECIAT_CH0002990 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rec01005
]
RHECIAT_CH0002990 (lpxC)
Enzymes [BR:
rec01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RHECIAT_CH0002990 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rec01005
]
Lipid A
RHECIAT_CH0002990 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
RebB
Motif
Other DBs
NCBI-ProteinID:
ACE91939
LinkDB
All DBs
Position
complement(2990672..2991628)
Genome browser
AA seq
318 aa
AA seq
DB search
MAIGLLGFQTTVSRPVTLSGIGVHSGANVSITLNPAESDTGVVFQRLHDNGDVTELKAVS
SQVGNTDLCTVLGFSPTHSVATIEHVMAAIYALGLDNVVIEVQGAEMPIMDGSSLPFVEA
IEQAGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTRFEVEIDFDCPLIGRQKWAGD
MSATVFKTELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
FVRHKTLDAVGDLSLAGVQFIGCYRSYRGGHKMNANALKALLADPSAYEVVETSTPRQRV
AAREMIAVSASEFAPWSA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcaattggcttgctgggttttcaaacgacggtatcgcgtcccgtgacgctctcgggc
atcggggtccattcgggtgcgaatgtctcgatcacgctgaacccggcggaatcggacacc
ggcgtcgttttccagcgcctgcacgacaatggcgatgttaccgaactcaaggccgtctct
tcgcaagtgggcaataccgacctctgcaccgtgctcggcttttcgccgacgcattcggtt
gcgacgatcgaacatgtcatggccgccatctatgcgctcggcctcgacaatgtggtgatt
gaagtgcagggcgccgaaatgccgatcatggacggcagttcgctgcctttcgtcgaggcg
atcgagcaggccggtcttgtctcgctcggcgtcaagcgtcgctatatccgcatcaccaag
ccggtgcgaatcgagcatggcggatcctggagcgaattccgtccctatgacggcacgcgc
ttcgaggtcgagatcgatttcgactgcccgctgatcggccggcagaaatgggccggcgac
atgagcgcaacggtcttcaagaccgagctttcccgcgcccgcaccttcggcttcatgcgc
gatgtcgagcggctctgggcttcgggccatgcgctcggctcgtcgctcgaaaattccgtc
gtcatctccgatgacaacaccgtcatcaacgtcgaagggctgcgttacgccaaggacgag
ttcgtccgccacaagacgctcgatgccgtcggcgacctgtcgctcgccggcgtccagttt
atcggttgctaccgttcctatcgtggcggccacaagatgaatgccaatgctttgaaggcg
ctgctcgccgatccctccgcttatgaagtggtcgagacgtcgacgccgcgccagcgcgtc
gctgctcgggaaatgatcgccgtcagcgcttcggaattcgctccctggtcggcatga
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