Rhizobium etli CIAT 652: RHECIAT_CH0003945
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Entry
RHECIAT_CH0003945 CDS
T00720
Symbol
nth
Name
(GenBank) endonuclease III protein
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHECIAT_CH0003945 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0003945 (nth)
Enzymes [BR:
rec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RHECIAT_CH0003945 (nth)
DNA repair and recombination proteins [BR:
rec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHECIAT_CH0003945 (nth)
Prokaryotic type
RHECIAT_CH0003945 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HRDC
HHH_5
SecA_PP_bind
PsbU
Motif
Other DBs
NCBI-ProteinID:
ACE92882
UniProt:
B3Q0U1
LinkDB
All DBs
Position
4000768..4001574
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AA seq
268 aa
AA seq
DB search
MTVEYRFSMANPKLKSVGKLSQNSNVIARRKPAAAVKTAYSPAEREEIFRRFSVQRPEPR
GELEHTNPFTLVVAVALSAQATDAGVNKATRALFKIADTPQKMLDLGEEKVRDYIKTIGL
YRNKAKNVIALSQMLVDEFAGRVPETREELVRLPGVGRKTANVVLSMAFGQATMAVDTHI
FRIANRIRLAPGKTPDEVEARLMKVVPKHYLYHAHHWLILHGRYTCKARRPECERCVIAD
ICKSPEKSSDIPAPLVELPPQLIGEAVD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgagtatagattctccatggcgaatccgaaactcaaatccgttggcaaacta
tcgcaaaactcgaatgtgatcgcccgccgcaagccggcggcggcagtgaagacggcctat
tccccggccgagcgtgaggaaatcttccgacgtttctcggtgcagcggccggaaccgagg
ggcgagctcgaacacaccaatcctttcaccctcgtcgtcgccgtcgcgctctccgcccag
gccaccgatgccggggtcaacaaggcgacgcgggcgcttttcaagattgccgatacaccg
cagaaaatgctcgatctcggcgaggagaaggtccgcgattacatcaagacgatcggcctt
tatcgcaacaaggcaaagaacgtcatcgcgctttcccagatgctggtcgacgaattcgcg
ggcagggtaccggagacacgtgaggaactggtccgcctgcccggcgtcggacgcaagacc
gccaatgtcgtgctctccatggccttcggccaggcgactatggcggtcgacacgcatatt
ttccgtatcgccaaccgcatccggcttgctcccggcaagacgcctgatgaggtcgaggcg
cggctcatgaaggtggttccgaaacactacctctatcacgcccatcactggctgatcctg
catggccgctatacctgcaaggcgcgccgtcccgaatgcgagcgctgcgtcatcgccgac
atctgcaaatcgccggaaaaaagttcggatattccggcgccgctcgtcgagctaccgccg
cagctgatcggtgaggccgtcgactaa
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