Rhizobium etli bv. mimosae IE4771: IE4771_CH03999
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Entry
IE4771_CH03999 CDS
T03310
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IE4771_CH03999 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rei03400
]
IE4771_CH03999 (nth)
Enzymes [BR:
rei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IE4771_CH03999 (nth)
DNA repair and recombination proteins [BR:
rei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IE4771_CH03999 (nth)
Prokaryotic type
IE4771_CH03999 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HRDC
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIC29061
UniProt:
A0A060IBJ1
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All DBs
Position
3989661..3990467
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AA seq
268 aa
AA seq
DB search
MAVEYRFFMANPKLKSVGRPSQNSNVITHRKPAAAVKTAYSVAEREEIFRRFSVQRPEPR
GELEHTNPFTLVVAVALSAQATDAGVNKATRALFKVADTPQKMLELGEEKVRDYIKTIGL
YRNKAKNVIALSQMLVDEFAGKVPETREELVRLPGVGRKTANVVLSMAFGQATMAVDTHI
FRIANRIRLAPGKTPDEIEARLMKVVPKQYLYHAHHWLILHGRYTCKARRPECERCVIAD
ICKSPEKSWDIPAPLVELPPQVIGEAVE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgagtatagattcttcatggcgaatccgaaactcaaatccgttggcagaccg
tcgcaaaactccaatgtcatcacccaccgcaaaccggcagcggcggtgaaaaccgcctat
tccgtggctgagcgcgaggagatcttccgccgtttctcggtgcagcggccggaaccgagg
ggcgaactcgagcacaccaaccccttcaccctcgtcgtcgccgtggcgctctccgcccag
gccaccgatgccggggtcaacaaggcgacgcgagcgctcttcaaggtcgccgatacgccg
cagaaaatgctcgaactcggcgaagagaaggtccgcgactacatcaagacgatcggcctt
tatcgcaacaaggccaaaaacgtcattgcgctctcgcagatgctggtcgacgaattcgcg
ggcaaagtaccggaaacccgcgaggaactggtccgcctgcccggcgtcgggcgcaagacc
gccaatgtcgtgctgtccatggccttcggccaggcgacgatggcggtcgacacccacatt
ttccgcatcgccaaccgcatcaggctcgcccccggcaagacgcccgacgagatcgaggcg
cggctgatgaaggtggttccgaaacagtacctctatcacgctcatcactggctgatcctg
cacggccgctacacctgcaaggcacgccgccccgaatgcgagcgctgcgtcatcgccgac
atctgcaaatcgccggagaaaagttgggatattccggcgcccctcgtcgagctaccgccg
caggtgatcggcgaggccgtcgagtaa
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