Rhizobium etli bv. mimosae Mim1: REMIM1_CH04223
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Entry
REMIM1_CH04223 CDS
T02778
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00220
Arginine biosynthesis
rel00250
Alanine, aspartate and glutamate metabolism
rel00430
Taurine and hypotaurine metabolism
rel00910
Nitrogen metabolism
rel01100
Metabolic pathways
rel01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
REMIM1_CH04223 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
REMIM1_CH04223 (gdhB)
00220 Arginine biosynthesis
REMIM1_CH04223 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
REMIM1_CH04223 (gdhB)
Enzymes [BR:
rel01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
REMIM1_CH04223 (gdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT2
GDH_HM1
GDH_ACT3
GDH_ACT1
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
AGS23931
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All DBs
Position
4252850..4257625
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AA seq
1591 aa
AA seq
DB search
MAARNNLKREKQIETARKIAKAMNEAHLDPEILFGRASNDDLELYTPDMLARSAVHSAKE
LAAWNGKAPRVSIDTIAEVTPGGTAVSVLSVTDQNMPFLYESVMGEVTSTYRDLFMAVHP
ILVMEKGKAPALYSADHPSDPAARVSHIQLHIAPLNSTQAADLVKRVQTVLEQVRLSVSD
WKPMLAKLDGVIAELSANGAGRRKAEHAEAVAFLTWLRDENFTFLGMREYVYSGKGADAK
VERDKGAGLGILSNPDVLVLRTGKDAVTTTPEILAFLEGPEFLIVTKANVKSIVHRRAYM
DYVGVKRFDAEGNVTGELRIVGLFTSTAYTSPASEIPLLRSKIEKVKEHFGYDPMSHSGR
MLDNTLESYPRDDLFQIDTTLLASFAEQINDLADRPRVRVLPRIDHFDRFVSVIVYVPRE
EYDSIVRERIGTYLKTVYDGRVSAYYPAFPEGGVARVHFIIGRSGGKTPRIPQAKLEQTI
REITARWDDRFEALAGPKAPKISVDQAFQDSFTPEETVADLADIGACAAGEPLRIQFYHR
QEDHGRILSLKIFHAGGQLALSRRVPLLENLGFNVVSERTFDIGVPVADGETKLVVLHDM
ELETRNGHDVDLHRYGAALEEAFVAAFAGTIDNDSFNRLILSAGLSARETNVLRAYARYL
RQAGIAYSQDYIATTLDKYPGVAAAIFRLFHDTLDPKLSDKARVKKIADLHQAIEAELAD
VPSLDDDRILRRYVNIVDATLRTNYFQKNPDGSPKAMLAFKLDPHLVDGLPQPKPFREMF
VYGVEVEGVHLRFGKVARGGLRWSDRAEDYRTEVLGLVKAQQVKNAVIVPVGAKGGFYPK
KLPVGGNRDEIFNAGREAYKTYIRTLLSITDNISGAEVVPPADTIRLDGDDPYFVVAADK
GTATFSDTANALAQEAGFWLDDAFASGGSAGYDHKKMGITARGAWETVKRHFREMDIDIQ
TTPFTVAGVGDMSGDVFGNGMLLSPKIRLVAAFDHRDIIIDPDPDTDKTLAERQRLFNLP
RSSWQDFDKNVLSKGAMIISRSAKSVTLTPEAVSAIGIDKAVATPFEIMTAILKSPVDLL
WFGGIGTYVKAASETDTEVGDRANDPIRITAAEVGARVIGEGANLGVTQKGRIAYGLRGG
RCNSDAIDNSAGVNTSDVEVNIKIALAAAMHDGRLTRAKRDQLLSSMTAEVAALVLRNNY
LQSLAISLTERKGTANGLELGRFMSVLEAAGQLNRKVETLPDDQTLAERYTAGKPLTRPE
IGVLVSYAKIVLFDALAASDLPDDPYFASTLSNYFPVKMQKSNAGDIARHRLRREIIATV
LANEAINRGGPSFIVAMMDATAASAPEVVRAAIVARDGFDLTRLWAETDALDGKISGGVQ
NSIYEEISHSFVVLTRLLLKTAMTKADMAEVISRLQVALKKLRPAFAEQAAADAAARQAE
YVQAGVPEKLAAEIANLQSFALVPEIMQIAERTGEPLVRAAENYFAVSKTFRIARLLAAG
GRILTSDHYENLALARSIDQIASARRDIVISALSDHGKEKLPVQAWHAQDRVRINRIVEE
LSSLSDSGDPNLARITVAAGILTDLARDRAR
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagaaacaatttgaaacgggagaagcagatcgaaactgcgcgcaagatcgcc
aaggcgatgaacgaggcgcatctcgatccggaaattctcttcggccgggcgagcaatgac
gatctggaactctatacgcccgacatgctggcgcgctctgccgtgcattcggcaaaggaa
cttgccgcatggaacggcaaggcgccccgcgtcagcatcgacacaattgccgaggtgacg
cctggcggcaccgccgtttcggtgctgtcggtgactgaccagaacatgcctttcctttat
gagtcggtcatgggtgaagtgacgagcacctatcgcgatctgttcatggccgtgcacccc
atcctcgtcatggaaaagggcaaagcccccgcgctctattccgccgaccacccgagcgat
cccgccgcccgcgtcagccatatccagctccacattgccccgttgaactccacccaggct
gccgatctcgtcaagcgcgtccagaccgtgctcgaacaggtccgcctatcggtctcggac
tggaagccgatgcttgccaagctcgacggggtgatcgccgagctttcggccaacggcgcc
ggccgcaggaaggccgaacatgccgaggcggtggccttcctgacctggctgcgcgacgag
aatttcaccttcctcggcatgcgcgaatatgtctattccggcaagggcgccgacgccaag
gttgagcgggacaagggcgccggcctcggcattctctccaacccagacgttctcgtgctg
cgcaccggcaaggacgccgtgaccacgacgccggagatcctcgccttcctcgagggtccc
gagtttttgatcgtcaccaaggcgaatgtaaaatcgatcgtccatcgccgcgcctatatg
gattatgtcggcgtcaaacgtttcgatgcggagggcaacgtcaccggcgagctgcgcatc
gtcggtcttttcacctcgacggcctatacctcgcctgcctccgaaatcccgctgctgcgg
tcgaagatcgaaaaggtgaaggagcatttcggctacgacccgatgagccattccggccgc
atgctcgacaacacgctggaatcctacccgcgcgatgaccttttccagatcgacacgacg
ctgcttgcgagctttgccgagcagatcaacgatctcgccgatcggccgcgcgtgcgcgtc
ctgccgcgcatcgaccatttcgaccgcttcgtctcggtcatcgtctatgtgccgcgtgag
gaatatgactcgatcgttcgcgagcggatcggcacctatctgaagacggtctatgacggc
cgtgtctccgcttattatccggctttccccgaaggcggcgtcgcccgcgtgcatttcatc
atcggccgctccggcggcaagacgccgcgcattccgcaagccaagctcgagcagacgatc
cgcgaaatcaccgcccgctgggacgaccgtttcgaagcgctggccgggcccaaggcgccg
aaaatatcggtcgatcaggccttccaggattccttcaccccggaagaaaccgtcgctgat
ctcgccgatatcggcgcctgcgccgccggcgagccgctccgcatccagttctatcatcgt
caggaagaccatggccgcatcctctcgctgaagatcttccacgccggcggtcagttggcg
ctgtcgcgccgcgtgccgctcctcgagaacctcggcttcaatgtcgtcagcgaacgcacc
ttcgatatcggagtgccggtcgccgacggcgaaaccaaactcgtcgtgctgcacgacatg
gagctcgagacccgcaacggccacgacgtcgacctgcaccgttatggcgctgcgctcgag
gaagccttcgtcgccgccttcgccggcacgatcgacaatgacagcttcaaccggctgatc
ctttcggcggggctctcggcccgtgagacgaatgtgctgcgcgcctatgcccgttatctt
cgccaggccggcatcgcctattcgcaggactatatcgcaacgacgctcgacaaatatcct
ggtgtcgccgcagcgatcttccggctgttccacgacacgctcgatccaaagctttccgac
aaggcccgagtcaagaagatcgccgacctgcaccaggcgatcgaggccgagcttgccgac
gtgccgagcctggacgacgaccgcatcctgcgccgctacgtcaacatcgtcgacgcgacg
ctgcgcaccaactatttccagaagaaccccgatgggtcgccgaaagccatgctggcgttc
aagctcgatccgcacctggtcgacgggctgccgcaaccgaaacccttccgcgagatgttc
gtctacggtgtcgaagtcgaaggcgtgcacctgcgcttcggcaaggtggcgcgcggcggc
ctgcgctggtcggaccgcgccgaggattaccgcaccgaggtactcggcctggtcaaagca
cagcaggtgaagaacgccgtcatcgtgccggtcggcgccaaaggcggcttctacccgaaa
aagctgccggtgggcggcaaccgcgacgagatcttcaatgccggccgcgaggcttacaag
acctatattcgcacgctgctgtcgatcaccgacaacatctccggcgccgaggtcgtgccg
ccggcggatacgatcaggctcgatggcgacgatccctatttcgtcgtcgccgccgacaag
ggcaccgcgaccttctccgacaccgccaatgctctggcgcaggaggccggcttctggctg
gacgacgccttcgcctccggtggctcggccggttacgatcacaagaagatgggcatcacc
gcccgcggcgcctgggaaaccgtaaaacgccatttccgcgaaatggacatcgacatccag
acgacaccctttaccgtcgccggcgtcggcgacatgtcgggcgacgtcttcggcaacggc
atgctgctctccccgaagatccggctcgttgccgccttcgatcaccgcgacatcattatc
gatcccgatcctgacacggataagacgctggccgagcggcagcgccttttcaatctgccg
cgctcgagctggcaggacttcgataagaacgtcctttcgaagggcgcgatgatcatttcg
cgctcggcgaaatcggtgacgctgacgccggaagcggtgagcgcgatcggcatcgacaaa
gccgtggccacacccttcgagatcatgacggcgatcctgaagagcccggtcgatctgctc
tggttcggtggcatcggcacctatgtcaaagcggcgtccgaaaccgataccgaagtcggc
gaccgcgccaatgacccgatccgcatcacggcggcggaggtgggcgccagggtgatcggc
gagggcgccaacctcggcgtcacgcagaagggccgcattgcctatggcctcaggggcggg
cgctgcaattccgacgccatcgacaactcggccggcgtcaacacctcggacgtcgaggtc
aacatcaagatcgcgctggcggccgccatgcatgacgggcggctgacgcgggcaaaacgc
gatcagcttctttcgtcgatgactgctgaagtggcggctctcgtgctgcgcaacaattat
ctccagtcgctggcgatctcgctgacggagcgcaagggcacggcaaatggactggagctc
ggccgcttcatgagcgtgctcgaagccgccggtcagctgaaccgcaaggtcgagactttg
cctgacgaccagacccttgctgaacgctatacggcgggcaagccgctgacgcggccggaa
atcggcgtgctggtgtcctatgccaagatcgtgctcttcgacgcgctcgccgcaagcgat
ctgcccgacgacccctattttgcctcgacgctgtctaattatttcccggtcaagatgcag
aagtcgaacgcaggcgatatcgcccgccaccgcctgcggcgtgaaatcatcgcgaccgtg
cttgccaacgaagcgatcaaccgcggcgggccgagcttcatcgtcgcgatgatggatgca
acggcggcttcggcgccggaagtggttcgcgccgcaatcgttgcgcgtgacggtttcgac
ctcacccgactctgggcagagacggatgcgctcgacggcaagatatcgggcggggtgcag
aacagcatctacgaggaaatcagccacagctttgtcgtgctcacgcgcctgctgttgaaa
accgccatgaccaaggcggacatggccgaggtgattagccggctgcaggtcgctcttaag
aagttgcggcctgctttcgcagaacaggcagccgccgatgccgccgcacgccaggcggag
tacgtgcaggcgggcgtgcccgaaaagctcgctgccgagatcgccaacctccagagcttc
gcgctggtgccggagatcatgcagatcgccgagcgcaccggcgagccgctggtgcgtgcg
gccgaaaattattttgcggtgtcgaagaccttccggatcgcccggctgctggcggcaggc
ggccgaatcctcacctccgaccactacgaaaatctggcgctcgcccgcagcatcgaccag
atcgctagcgcccggcgcgacatcgtcatctcggcgctttccgatcacggcaaggagaag
ctgcccgtccaggcctggcatgcgcaggatcgcgtccgcatcaaccgcatcgtcgaggaa
ctttcgagcctcagcgacagcggcgatcccaatcttgcgcgcattaccgttgccgcaggc
atcctgaccgatcttgcgcgagaccgggcgaggtga
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