Rickettsia endosymbiont of Culicoides impunctatus: LF885_06340
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Entry
LF885_06340 CDS
T10695
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Pathway
rem00300
Lysine biosynthesis
rem00550
Peptidoglycan biosynthesis
rem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LF885_06340
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LF885_06340
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rem01011
]
LF885_06340
Enzymes [BR:
rem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LF885_06340
Peptidoglycan biosynthesis and degradation proteins [BR:
rem01011
]
Precursor biosynthesis
Amino acid ligase
LF885_06340
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DctP
zf-UBP_var
Motif
Other DBs
NCBI-ProteinID:
UCM86393
LinkDB
All DBs
Position
complement(1308558..1310003)
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AA seq
481 aa
AA seq
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MNSCSLCCDSRLAKAGDIFFAIKGVDSDGNKFIDDAINKGVRFIVTDDAESLNNPNITAN
DVHINLVSDARLALSQAANILYPLLPPYMVAATGTNGKTSVVSYCRQLYTLLGVPSCSIG
TIGVECASGLDLSVQDILDKSPALTTLDPITFKHILHKLTENNTKYVAFEASSHGLDQQR
LCGVKVNAACFTSFSQDHLDYHQNMDKYLLAKLKLFTDNLLPTGTAVLNSEIAQLDYIKH
YLQQRNIKFLTVGMNGDLKIIDSTIPGHKVCDYKGQKYNFTTDIVGSFQASNLLIAVMMV
HLTGFPLEQVISKLSQVKAVKGRLERVGNSNVFIDYAHTPDALEKSLLELRKIKSDKGLL
KVIFGCGGDRDSSKRPLMGQVAAKIADEIIITDDNPRNEDPKSIRQQIIPAIIAITNSFI
EIKNRKIAITETIHNLQKDDILLIAGKGHENYQIIGNKKLPFNDFDIANKALQNKNKLID
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttgcagtttgtgctgtgactctagactagctaaagctggtgatatattcttt
gcgattaaaggagtggattctgatggtaataaatttattgatgatgcaataaataaaggg
gtgagatttattgttacagatgatgctgagagtttaaacaatcccaatattaccgccaat
gatgtacatataaatcttgtgagtgatgcacggttggcactgagtcaagctgctaatatt
ctctacccattattaccaccatatatggtagctgctactggtactaacggtaaaacctcg
gtagtatcatattgtaggcaactatatacattattaggagtaccaagctgttctatcggg
actattggcgtagaatgtgccagtggtttggatttaagcgtccaagacattttagacaaa
tccccggctcttactactcttgatcctataacttttaaacatattttacataagctaact
gagaataacacaaaatatgtagcttttgaggcttctagccatggtttagatcaacaaaga
ttatgtggtgtaaaagtaaatgctgcttgctttactagttttagtcaagatcaccttgac
tatcaccaaaatatggataagtatcttttagccaaactaaaattatttacagataattta
ttgccaacaggaacggctgtgttaaactcagaaatagcacaattagattatattaaacat
tatttacaacaacgtaatataaagtttttaacagtgggtatgaatggtgatctgaaaatt
atcgacagcacaattcctggacataaggtttgtgactataaagggcaaaaatataatttt
actactgatatagttggtagttttcaagctagcaacttactgattgctgttatgatggtg
catttgactggctttcctttggaacaagttatatcgaagttatcgcaagttaaagcagtt
aaagggcgtttagagagagtaggtaatagtaatgtgtttatcgactatgctcatacccca
gatgctttggaaaaaagcttactggagttaagaaaaataaaatcagataaggggttatta
aaagtaatttttggttgtggtggtgatagagatagcagtaaaagaccattaatggggcaa
gttgcggcgaaaattgccgatgagattattattactgatgacaatccaagaaacgaagat
ccaaaatcgatacggcagcaaattataccagctattatagcgatcactaatagttttata
gaaataaaaaatagaaaaatagcaattactgagacgatacataatttacaaaaagatgat
attttgctaattgccggcaaaggtcacgaaaattatcagataatcggtaataaaaaacta
ccctttaacgacttcgatatagccaataaagctctacaaaataaaaataaacttattgac
aattaa
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