Rhopilema esculentum: 135689815
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Entry
135689815 CDS
T09994
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
res
Rhopilema esculentum
Pathway
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135689815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
res03041
]
135689815
Spliceosome [BR:
res03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135689815
Complex C
U5 SnRNP specific factors
135689815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
EF-G_D2
Roc
Septin
TsaE
TniB
Motif
Other DBs
NCBI-GeneID:
135689815
NCBI-ProteinID:
XP_065063244
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MEAELYDEFGNYIGPELESEEESEGEDAEEELVQDADEDDEMRDDGMEEAEPEMAVVLHE
DKKYYPTAEEVYGPEVETLVQEEDEQPLTEPIIKPVVKKKFALIEQELPTTVYSMEFLAD
LMDTPDLIRNVALVGNLHSGKTTFVDSLFEQTHADLRAKDGRDLSYTDTLVIEKERQLSI
KSTPVTFVLQDCKDKSHLINIFDVPGHVNFSDEMTAAFRLCDGAVIFVDAAEGVMMNVER
ALKHAVQERLKVTICINKIDRLILELKLPPTDAYYKLKHIIDEVNSLLNVYAEGTDDTIV
SPLLGNVCFASSQYRFCFTLQSFAKLYCDTFGGGIHYNDFAKRLWGDIYFNQKTRKFTKK
APLSTSPRSFVEFILEPLYKLFAQVVGDVDTTLPKALEELGIHLSKTELKMNIRPLMRLV
CSRFFGEFTGFVDMVVRHVPSPAAAAETKVDHIYTGPKDSEISDSMIYCDSDGILMVHTS
KLYATEDGIQFHAFGRVMSGTLHAGQQVKVLGEGYTIDDEEDSRVSLVGRLWINEARYKV
EVNRVPAGNWVLIEGIDELIVKTATITSMKGSEDVHIFRPLKFNTTSVIKVAVEPVNPSE
LPKMLDGLRKINKSYPLITTKVEESGEHIILGTGELYMDCVMHDLRKMYSDIDIKVADPV
VTFCETVVETSSLKCFAETPNKKNKLTMISEPLEKGLAEDIEAGKVQISWDKKRLGEFFQ
TKYDWDLLAARSIWAFGPDAAGPNILVDDTLPSEVDKNLLNSVRDYIVQGFQWGTREGPL
CDEPIRNVKFKILDAGIAMEPIHRAGGQIIPTSRRVAYSAFLLATPRLMEPYYYVEVQAP
ADCVSSVYTVLAKRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLS
VFHHWQIVPGDPLDKSIIIRPLDIQPATHLAREFMIKTRRRKGLSEDVNIDKFFDDPMLL
ELARQDVILSYPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaactatacgatgagtttggaaattacattggcccagagttggagagcgaa
gaagaaagtgaaggggaagatgctgaggaagagttagtgcaagatgcagatgaagacgat
gaaatgcgagatgatgggatggaagaggccgaaccagaaatggcggtcgttttacacgaa
gataagaagtattacccaacggcggaagaggtatacgggcctgaagttgaaacacttgtt
caagaagaagacgagcagcccttgacagagccaattattaagcctgttgtgaagaagaaa
tttgctttgattgagcaagaacttccaacaactgtttacagcatggagtttttggctgat
ctaatggacactccagacctaatacgtaatgttgctttagtaggaaatctgcattctggc
aagacaacttttgttgattccctgtttgagcaaacccatgctgatctgcgggcaaaggat
ggcagggatctgtcatacactgacacccttgttattgagaaagaacgacagctgagcata
aaatcaacaccagttacattcgtccttcaagactgtaaagacaaatcacatttgataaac
atttttgatgtccctggtcatgtgaatttttctgatgaaatgactgcagcgtttcgacta
tgtgatggggctgtcatttttgttgatgcagcggaaggtgtcatgatgaatgtggagcga
gccctgaagcatgcagtgcaagaacgactaaaggttacaatatgcatcaacaagatagac
cgcctgattctagagttgaagctgccaccaactgatgcctattataaactgaaacatata
atagatgaagtgaattctcttcttaatgtgtatgctgaaggaactgatgacaccatcgtt
tcccctctactgggaaatgtctgctttgcaagttcacaatacagattctgctttactttg
caatcatttgcaaaactttactgtgatacctttggtggaggaattcactacaatgacttt
gccaagcgcctgtggggggacatatacttcaaccagaagactcgtaagtttactaaaaaa
gcccctctcagtacttctccaagaagctttgttgaattcattctagagccactgtataaa
ctgtttgcccaagtagtaggggatgttgatacaacactacctaaagcattagaggagctt
ggtatccatctgagcaagacagaattgaaaatgaacatacgtccactgatgaggcttgtt
tgtagtaggttttttggagaattcactggttttgttgacatggttgttcgccatgttcca
tctcctgctgctgctgctgaaacgaaggtagatcatatttacactgggccaaaagattca
gaaataagtgactcgatgatctactgtgattctgacggcattttgatggtgcatacaagc
aagctgtatgctactgaagatggcatacagttccatgcatttggtcgtgttatgagtgga
actctgcatgcaggccagcaagtaaaggtccttggtgaagggtatacgattgatgatgag
gaagattcaagagtcagtcttgttggcagactgtggatcaatgaagcaaggtataaagta
gaggtcaatcgtgtgccagctgggaactgggttctaatcgaaggaattgatgagctcatt
gtaaaaacggctacaattacaagcatgaaaggatctgaagatgttcacatatttaggcca
ttaaagtttaacacaacctctgtgatcaaagtcgctgttgagcctgtcaacccgtcagag
cttccaaaaatgttggatggactgagaaaaatcaacaaaagttatcctttgataacaaca
aaggtggaagagtctggtgagcatattattcttggtacaggagaactttatatggattgt
gtaatgcatgatctgcgtaaaatgtattctgatattgatatcaaggtagctgatccagta
gtcacattctgtgaaactgttgttgaaacatcatccttgaagtgttttgctgagacgcca
aataagaagaacaagttaaccatgatttcagaaccgttagagaaaggtcttgcagaagac
attgaagctggcaaagtccaaatttcatgggacaaaaagcgtcttggagagttcttccaa
acaaagtatgactgggacttgttagctgccagatcaatttgggcttttggccctgatgca
gctggcccaaacatacttgtagatgacacactaccaagtgaagttgacaagaatctgctt
aattctgtgcgggactacattgtacaggggttccagtggggcacgagagaagggcctctt
tgtgatgagccaataagaaatgtcaagttcaagatccttgatgctggaatcgcaatggag
ccaattcacagagcaggtggccagatcattccaacatcaagaagagtagcatactctgca
tttctactggcaacacctcgactgatggagccatactactatgtagaagtgcaagcacca
gcagattgtgtgtcatcagtttacactgtgctggcaaagcgaagaggtcatgtcactcaa
gatgcgcccattcctggctctccattgtataccataaaggcgtttattccagctattgat
tcatttggttttgaaacagatcttcgtacacacacgcaaggccaggccttttgcctgtca
gtcttccatcattggcagattgtacccggagatccactggataaaagcattattatacgt
ccacttgatatccaaccagccacacatcttgcaagagagttcatgattaaaacacgaaga
agaaagggcctaagtgaagatgtaaatattgacaagttctttgatgatcctatgttgttg
gagcttgcaagacaagatgtcattcttagttatcccatgtga
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integrated database retrieval system
