Rhopilema esculentum: 135689992
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Entry
135689992 CDS
T09994
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
res
Rhopilema esculentum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
res03036
]
135689992
03400 DNA repair and recombination proteins [BR:
res03400
]
135689992
Chromosome and associated proteins [BR:
res03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
135689992
DNA repair and recombination proteins [BR:
res03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
135689992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Big_1
Motif
Other DBs
NCBI-GeneID:
135689992
NCBI-ProteinID:
XP_065063462
LinkDB
All DBs
Position
Unknown
AA seq
2020 aa
AA seq
DB search
MADENGDESPDEGYVFVFDRRNVDGKSVKIPLGGLFDYSLFKTRVLEEFEIGEDEDFVVV
STSRIPILDDLSYEEMIESGDTLYLLNDAKQELLAPVQEHIEYLPHYDTLVKSGMYEYYA
SAGQSPLPFAIAELIDNALAATVSNDGPREIKVFLCFENTPGDNLICVSDNGRGMTPKDL
NNWAIYRLSKFNRQMQAGKTSPMKKKIRDEPRSLNSDISYFGVGGKQAIFFIGNATRVIT
KTKGSNDVHELSLSKADFERKAKLKEPIYAGFINNRRIGDCSHIPQNCKTEREFVESEKN
KNSFTNIIIDGIEMETVKFLRQNFKCLCKQLSHIYHYYLHGPMGKVPKRNAGVRIESPFK
NIDIKVILREKGSTSHQVSLSDIEDDLESLIVDSAASHFEFNAHVQEVGKVEGVLRYHPF
LYDKETFPHSPNVQFTGDQTGGDVEEELRIDSRSPRGDKPIFECFWNGRLIPYTTIDYLD
WCAPLKKRSLVPTECYYRVSGALFTNDSFQVSTNKLTFMDLEVKLRDRSTVFSKVVMGQE
QRVNIGRAFNEWVKNCHEVCDKQIKFFGLDGNIKRTNPGQKRSQGIWSVYRGVEWDGKVF
KVGQLVRTTRTVPIVVGKLKRFLLAGIYDEDEVFATGGQMEITQEPESIFGELKVFPLAK
LDRAPSISSLKEFVQAEELRLPASLSVEWPEGNKVSEDDKVSAGSTIGPLRVDILNGRGE
SVSSMPGDRLRKLLVELKIVQLSETKGEKTLVQHTCSHGGKSWPYWFHKMENLKDVGYHV
IQLRTQLSDNTSTQIKSLPSLDIKFSIIEAQPDKFTVGLLETPLRIGLPFQIPLQLQDKF
GNVVKPSQNFGEPILTSSGMNFTSSGTCSRGTSLVIRDVVAMGAIPSTGGKDFNLMIRFS
GLKGKSQSIRIRLLPGLPSLIEVTEGQIVVENGEKFQLDVAVKDIAGNLTSQPRMNVCCK
LYGIPNLPVIICDCSSTGKGTLTSPQLKVKQTDSQQKIIARIDMQHYRNVSMTSREIVVK
PSTKASRFDVFYTPPGSEKQVKIENNQEIQCCAGDVVQGLSFILFDEGNRQLSIDSNVTS
KLKVNWVGRLNKEEVKRGRLPNIKAPTAVDDIKYCQVSFSVGDNTVEHVFHLKSTHAAPS
TLKSSCANVKFKMYEKLSADIVVSLYDVYGNMIKLDPKDFTDFSVSGEGLMHSFVSFISQ
GFFNIRNVSFEAGMPGPREVTIKMKEIVCYQRLEMLPGAASNLVLVDLDNEEPVEILNGS
EFPKPLTIQLIDSAGNLAKEKNVKCLLARDSGIKLTPPPPQQRTDANGQATFNQFSISAE
RGLYQLVPKAMLPSGTKEGPVVLVSVAPDRNKPVHVVAKFDETAAFIAGEKFPVVEAYVI
AEDQNPLTTIKKKDLVLKIFSSKSGKSSDSMSNAPVFTCTSGSLNSPKNHFFFREIVCPE
KAGQYNLVVQYIVDNTVILASRKFTITVNPNEAVKLVPVSVPATPTVTNNSKSASRQLVR
KLKFQLKDKFGNTAGTEIKGHLKVNVEAGDKEQVPMLQNGETSASFQLEKGSSSIESLLL
QSGSKGVDGKEYVLSFEAVLGDSEITKIEPFKLSFLFYDDVAKQAEMAEITKDRDRLTES
IDAYRFLFDALSQLYKEIQAALREATAEERNLKNELRVKNFNNVNSLKTYSQYIFFSEQK
EEVSNALALTRQKKVDLEAMPRRQCRLPRGPSDKDVIGKVAHLAELRDDDVARVLSWHLA
SDMDCVITVTLEQAKRIHKDSRGRQQVLPLESIYKKGLSDWKKPLPHIRYPGIKSSGSVV
YARDLLNFPEHQEHCKTVFIMLLGDTIIADNLDAANKYRQEVVKYTYCPTILTRTGDRIR
SNGKFGGLQNRAPPLERLSGVVFASPLPSDYHDVCAQLDLLSSLEAAAGKVEGKKMELQA
HIEHCNSEKVQKDYQECLEAENQLQSIEKRLGLTPRVGRLPPSLSEFLRRNGANCDDYRS
ANKRASVADVINEGPSPSKRGRTTPGPQHNAKKSFGQKRR
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaaacggtgatgaatctcctgatgaaggttatgtatttgtgtttgacaga
agaaatgtggacggaaagtcggtcaaaataccacttgggggactttttgattattctttg
tttaaaacacgagttctggaggagtttgaaattggggaagatgaggattttgttgttgtg
agtaccagcagaatacccatattggatgatttgtcatatgaggagatgattgaaagtggg
gacacattgtatttgcttaatgatgccaagcaagaactcctggcccctgtgcaagagcac
attgagtatctacctcactatgacactcttgttaaaagtggaatgtatgaatactatgcc
agtgctggacagagcccactaccatttgctattgctgagctgattgacaacgcacttgct
gcaacagttagtaatgatggcccaagagaaatcaaagttttcttgtgttttgaaaatacg
ccaggtgacaatttgatatgcgttagtgacaatggccgagggatgacacctaaagatctc
aacaactgggccatttatcgactatcaaagttcaacagacagatgcaagcaggcaaaact
agtccgatgaaaaagaagatacgtgacgagccccgttctttgaacagcgatataagttac
tttggggttggaggaaagcaagccatctttttcatcggcaatgcaacaagagtgatcaca
aagactaaaggatcgaatgatgttcacgagctttctctctcaaaggctgattttgaaaga
aaggccaaactgaaagaaccaatttacgcaggctttataaacaatcgcaggatcggtgac
tgctctcatattccgcaaaactgcaaaaccgagcgtgaattcgtcgagagcgaaaaaaac
aagaacagttttacaaatataatcattgatggtatcgagatggagacagtgaaattcttg
aggcagaatttcaaatgtctctgtaaacagctgagccacatataccattattaccttcac
ggaccaatgggcaaagttccaaaaagaaatgctggagtccgaatcgaaagtcctttcaaa
aacattgatatcaaggtgattcttcgcgaaaaggggtctacgtctcaccaggtttctctg
agtgatattgaagatgatctagagtcgttgatagtagattcagcggcaagccatttcgaa
ttcaacgcccacgtgcaagaagttggtaaagtggaaggggtcttaaggtaccatcccttt
ttatacgacaaggaaacctttcctcacagtccaaatgtccagtttacaggggatcaaact
ggaggtgatgttgaggaggagcttaggatagacagtcgtagcccacgaggggacaagcca
attttcgaatgtttttggaacggaagattgattccatacaccaccatcgattatctagat
tggtgtgctccactgaagaagaggtctcttgttccgactgaatgttattacagggtatcg
ggagctctgttcaccaatgattcattccaagtgagtacaaacaagttgactttcatggat
ctggaggtgaagctaagggatcgcagtaccgttttcagcaaggttgtcatgggacaggaa
cagagagtaaacattggcagagctttcaacgaatgggttaaaaattgtcatgaagtctgt
gacaaacaaataaaattttttgggcttgatggcaatataaaacgaactaaccctggtcag
aagcggagtcaaggaatatggtcagtttacagaggcgtcgaatgggacgggaaggtattc
aaggtcggccaactggtacgaacgactagaaccgtgccaattgttgttggtaaactaaag
cgatttctccttgctggaatatatgatgaagatgaagtttttgcgacaggcggtcaaatg
gaaatcacacaggaacctgaatctatatttggtgaactcaaagttttcccgttagccaag
cttgatagagctccttctatttcaagtctaaaagagtttgttcaagctgaggaactcagg
cttcctgcctcactttctgttgagtggcctgaaggaaacaaggtcagcgaagacgacaaa
gtgagcgctggctcaactatcgggccactcagagttgacattctcaatggtagaggagaa
tcagtgagttctatgcctggagatcgtcttaggaagttgctcgttgagctcaaaattgta
cagctttccgagaccaaaggtgaaaagacactcgtgcaacacacctgctcacacggagga
aaaagttggccctattggtttcacaaaatggagaacttaaaagatgttggctatcatgtt
atccagcttcgtacacagttatccgataatacttcgacgcagataaagtcactcccgtcc
ttggatatcaagttttctataatagaagcgcaaccagataagttcactgttggcttgctg
gagacgccattgaggattgggttaccgtttcagatcccattacaactacaagataaattt
ggaaatgttgtcaaaccaagccaaaactttggtgaaccgattttaacatcaagtggtatg
aacttcacttcaagcgggacttgttcccgaggtacttcccttgttatcagagatgtcgtt
gctatgggagcaataccgtcaactggagggaaggatttcaacctgatgattcgtttttct
ggtctgaagggaaaatcccaatcaatacgaattcggttgctacctggtctaccaagtcta
atcgaggtaactgaaggtcaaattgttgtggaaaacggtgaaaaattccagttagatgtt
gctgtgaaagacatagccgggaatttgacgtcacagccaagaatgaatgtctgttgcaag
ctgtatggaattccaaacctccctgtgattatatgcgactgcagctcaacagggaaaggt
accttgaccagcccacaattaaaagtcaaacaaacggacagtcaacagaaaattattgcc
aggatcgacatgcagcattatagaaacgtttcgatgaccagccgagagatcgttgttaaa
ccaagtaccaaagcctcgaggttcgatgttttttacactccgccaggaagtgagaaacaa
gtgaagattgaaaacaaccaagagattcaatgttgtgctggagatgttgttcaaggcctt
tcgttcatactgtttgacgaaggcaatcggcagctaagcattgattcaaacgtgacctca
aaattaaaggtgaactgggttgggagactgaacaaagaagaagttaagcgaggcagactc
ccaaatattaaggcccctactgcagtcgatgacatcaaatattgtcaagtgtccttcagc
gttggtgataacaccgtagagcatgttttccatttaaaatcaacccatgctgccccatcg
acactgaagtcttcctgcgccaatgtgaagttcaaaatgtacgaaaaattatcagcagac
atcgtagtctctctttatgatgtttacggaaatatgattaaactggatcctaaagatttt
acagatttctctgtatctggcgaaggactcatgcattcattcgtgtctttcatctcacag
ggatttttcaacataagaaatgtcagctttgaagctggtatgccaggtccccgagaagtc
accatcaaaatgaaagagattgtatgctaccaaaggcttgaaatgctgccaggtgctgca
tcaaatttagttctcgtcgatttggacaatgaagagcctgtagaaatattgaatggcagt
gaatttcctaagccattgacaattcagctgatagattctgctggtaacttggccaaagag
aagaacgtgaaatgtttgttagccagggattccggaatcaaactaactcctccgccacca
caacaaagaactgatgccaatggacaagctactttcaaccagttttcgatcagtgctgaa
cggggtttgtatcagttagttcccaaagccatgttgccttcaggaacaaaggaaggaccg
gttgtgctcgttagcgttgcacctgatcgaaataagccggttcatgtggttgcaaaattt
gatgaaactgctgctttcattgccggagaaaaatttccagttgttgaagcctacgtaatc
gctgaagatcagaacccgttgactacgatcaagaagaaagatcttgtcctgaaaatcttt
agcagtaaaagcggaaagtcatctgattccatgtcaaatgctccagttttcacctgcaca
tctggttctttgaacagcccaaagaaccatttcttcttcagagagattgtctgcccagaa
aaagctggccaatacaatttggttgtccagtatatcgttgacaatacggtaatacttgct
tctagaaagttcacaatcactgtgaatccaaatgaggcagtgaaattggttccagtttct
gtccctgcgacgccaactgtcacaaataacagcaaatcagctagcaggcagttggtgagg
aaactcaagttccagctcaaggataaatttggtaacactgccggtacagagataaaggga
catctgaaagtgaatgtcgaggctggagacaaggaacaggtgccgatgttacaaaatgga
gaaacgagtgcctcatttcagttagaaaagggaagttctagcattgaatcgttattgctt
caatctggttcgaaaggtgtcgatgggaaagaatatgtgctgtcttttgaggctgtgctt
ggcgattcagagataaccaaaatagagccatttaaattgtcatttcttttctatgatgat
gttgcaaaacaagcagaaatggccgagatcaccaaggacagagatcgactcactgaaagt
attgatgcataccgatttctttttgatgctttgtcgcaactttacaaagagatacaagct
gcgttgcgagaagctactgcggaggagagaaacttgaaaaatgaacttcgagtgaaaaat
ttcaacaacgtgaattcgctgaaaacatactctcagtatatatttttttcggaacagaaa
gaagaggtatcgaatgcacttgcgctcacgagacaaaagaaagtggatttagaggcaatg
ccgaggaggcagtgtcgtcttccccgtggcccaagcgataaggatgtgattggcaaggta
gcccatttggctgagcttcgcgatgacgatgttgcccgagttttgtcctggcatttagct
tctgacatggattgcgtcataacagtcactcttgagcaggccaaacggattcataaagac
tctcgagggcgtcaacaagtgttaccgttggagtccatctacaagaaagggttgtccgac
tggaaaaagccactaccgcatattcgctacccgggtattaaaagctccggatccgtggtc
tacgcccgggatttactaaatttccctgaacatcaagagcattgcaagacagtgtttata
atgcttcttggagatacaataatagcagacaacctcgatgctgctaacaaatatcggcag
gaggttgtgaaatatacgtactgtcctacaatactcaccagaacaggagataggatccgc
agcaatggaaaattcgggggtctgcagaacagagcacctccgttggagaggcttagtggt
gttgtgtttgcaagtccactgccgtctgattaccacgacgtctgtgcgcaactagatctt
ctgtcatctttggaggctgcagcaggcaaagttgaggggaagaaaatggaactgcaggct
catatcgaacattgtaactcggaaaaggtacaaaaggactatcaggaatgtctggaagcc
gaaaatcaattacaaagcatcgaaaaaagacttggactgactccaagagtaggccgcctt
ccaccaagtctgtccgaattcctaaggagaaatggggcaaactgtgatgactatagaagc
gctaataagcgtgcatctgtagctgacgtcataaatgagggcccatcaccaagcaaaaga
gggcgcacgactcctgggccacaacataacgcaaagaaatctttcggtcagaagcgaagg
tga
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