Rhopilema esculentum: 135695645
Help
Entry
135695645 CDS
T09994
Name
(RefSeq) TNF receptor-associated factor 6-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
res
Rhopilema esculentum
Pathway
res04120
Ubiquitin mediated proteolysis
res04140
Autophagy - animal
res04144
Endocytosis
res04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135695645
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135695645
04140 Autophagy - animal
135695645
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135695645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
res04131
]
135695645
04121 Ubiquitin system [BR:
res04121
]
135695645
Enzymes [BR:
res01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135695645
Membrane trafficking [BR:
res04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135695645
Ubiquitin system [BR:
res04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135695645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
TRAF3_RING
zf-Nse
zf-RING_5
RING_XB3-XBAT31
U-box
Sina_ZnF
zf-TRAF_2
zf-rbx1
zf-RING_6
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-GeneID:
135695645
NCBI-ProteinID:
XP_065070863
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MSSFQSYIGIAKTLNRDMAAAQQQRSMSGQFSIMDDDDNCTEGYDEDFDPPATAIMECPI
CLLVLRKPVQTACGHRFCYNCILKVIREGRKKCPVDNEDISEDQIYPDTFAKREIGNLTV
RCRNFGDGKCQWKGRLLELTPHLRDCMYEVVPCTNACGQSLLKANLQKHLKEECLKRIET
CTYCQKKVVFKDFDEHAGSCPEYPVHCPNNCSDDTYPRKKLDEHLKFVCVRAVVQCPFNV
FGCKFEGARADVSQHFEKSLMLHISELLANYTALAGKVDKEIVPVKSLQKASVPELSQKL
VEISGKVDALQAGVIDAKERGDQGIQLAELYYSNQNSVFSQLKESVKTLTERFDAREFTI
AEIQAKVWNGNFIWKINNFDKLFQQAKSNEVPAIHSVPFYTGIPGYKMCLRINLNGVDSG
ASTHVSMFIHLMQGEFDSILQWPFPGQIKLMAVDQSEEEQVHVTETLLSRPNLQAFIRPR
TPRNHKGYGYVEMISHIVLHSREYIKNNSMIVHVSVSLND
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctttcaaagttatattggcatagcaaaaacacttaacagagatatggctgca
gcacaacaacaaagaagcatgtctggacaattttcaatcatggatgatgatgataattgc
acagaaggttatgatgaagattttgacccaccagctactgctatcatggaatgtcccatt
tgcttgctggtgttaagaaagcctgtacaaactgcatgtggccatcgattttgctacaac
tgtatactaaaggttataagagaaggaagaaaaaagtgtccagttgacaacgaggacatc
agtgaagatcagatataccccgatacgtttgccaaacgtgaaattggaaacttaaccgtt
agatgtcggaactttggtgatggaaagtgtcagtggaagggtcgactgttagaactgacg
cctcatttgcgtgactgtatgtatgaggtggttccctgtacgaatgcatgtggccaaagt
ttgctgaaagctaacctccaaaagcacttaaaagaagaatgtttaaaaagaattgagacg
tgtacatattgtcagaagaaagtggttttcaaagactttgatgaacatgctggatcttgt
ccagaatatccagtacattgtccaaacaactgctcggatgatacttatcctagaaaaaag
cttgacgaacatttgaaatttgtatgtgttcgagcagtggtgcaatgccccttcaatgtt
tttggttgtaaattcgaaggggctcgtgctgatgtcagccaacatttcgagaaatcgcta
atgctgcatatcagtgagttacttgctaattacacggcactcgctggcaaagtggacaaa
gaaattgttcccgtgaaatctcttcaaaaagcatctgtaccagagctgtcacagaaattg
gtggaaatttcaggaaaggtagatgctttgcaggctggggtgatagatgccaaagaaaga
ggagaccagggaatccagctcgcagagttgtattactctaatcagaacagtgttttcagt
caactcaaggagagtgtgaaaacattaactgagcgttttgatgcacgagagtttacaata
gctgaaatacaagcaaaagtttggaacggtaattttatttggaagatcaacaatttcgat
aaattgtttcagcaagcaaagtcaaatgaggtcccagcaattcacagtgttccattttac
actggtataccaggatacaaaatgtgtcttcgaataaatctcaacggcgtcgactcgggg
gcatcaacacacgtttcaatgttcatccatttgatgcaaggggagtttgactcaatactg
cagtggccgtttccggggcaaatcaagctgatggctgttgaccagtcagaagaagaacag
gttcacgtaactgaaacgctcctctcaaggcctaatttacaagcattcataaggccgcga
acaccgagaaaccataaaggttacgggtatgttgagatgatttctcatatcgtactgcat
agccgcgagtatataaaaaacaattcaatgattgttcatgtttctgtttctttaaatgac
tga
DBGET
integrated database retrieval system
