Rhizobium etli CFN 42: RHE_CH03713
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Entry
RHE_CH03713 CDS
T00317
Symbol
exsD
Name
(GenBank) organic-radical-activating protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00790
Folate biosynthesis
ret01100
Metabolic pathways
Module
ret_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
RHE_CH03713 (exsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ret03016
]
RHE_CH03713 (exsD)
Enzymes [BR:
ret01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
RHE_CH03713 (exsD)
Transfer RNA biogenesis [BR:
ret03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RHE_CH03713 (exsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABC92468
UniProt:
Q2K3W8
LinkDB
All DBs
Position
3934105..3934833
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AA seq
242 aa
AA seq
DB search
MSVETIRVSEIFGPTIQGEGALIGLPTVFVRTGGCDYRCSWCDSLYAVDSAFRDQWLPMS
VEAIWQEVTKLSGGNPLTVSLSGGNPAIQPLRPLIELGHSKGYRFALETQGSVAQNWFRD
LDVLVLSPKPPSSGMHTDWDQVDNCVRLSAGGPEIALKVVIFDDVDYAFAREVGQRYPYI
PLYLQPGNHTPPPSEDEDARIDIDGVMDRMHWLVDKVTVDRWFAPRVLPQLHVLLWGNKR
GV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgagaccattcgcgtcagcgagatcttcggcccgaccatacagggcgaaggc
gcgctgatcgggctgccgacagtgttcgtcaggaccggcggctgtgattatcgctgttcc
tggtgcgacagtctttacgccgtcgacagcgccttccgggatcaatggcttcccatgtcc
gtcgaggcgatctggcaggaagtcacgaagctctctggaggtaacccgctgactgtttct
ctttccggaggcaatcccgcaatccagcctttgaggccgctgatcgagctcggccattcc
aagggatatcgcttcgcactggaaacacaggggagcgttgcccagaactggttccgcgat
ctcgacgtcctggtcctgagccctaagccgccgtcgagcgggatgcacacggactgggat
caggtcgacaattgtgttcggctttcagccggcgggccggagatcgcgctgaaagtcgtc
atctttgacgatgtagactatgcgttcgcgcgagaggtgggccagcgctacccttatatt
cccctgtaccttcagccgggcaaccatacaccgccgccgtccgaagacgaagacgcgcgc
atcgatatcgacggcgtgatggatcgcatgcattggcttgtcgacaaggtgacggtcgac
cgatggtttgcaccgcgcgtcctgccgcagctgcacgtgctgctgtggggaaacaaacga
ggcgtctga
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