Cupriavidus pinatubonensis JMP134: Reut_A1886
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Entry
Reut_A1886 CDS
T00268
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
reu
Cupriavidus pinatubonensis JMP134
Pathway
reu03030
DNA replication
reu03410
Base excision repair
reu03420
Nucleotide excision repair
reu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
reu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Reut_A1886
03410 Base excision repair
Reut_A1886
03420 Nucleotide excision repair
Reut_A1886
03430 Mismatch repair
Reut_A1886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reu03032
]
Reut_A1886
03400 DNA repair and recombination proteins [BR:
reu03400
]
Reut_A1886
Enzymes [BR:
reu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Reut_A1886
DNA replication proteins [BR:
reu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Reut_A1886
DNA repair and recombination proteins [BR:
reu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Reut_A1886
NER (nucleotide excision repair)
GGR (global genome repair) factors
Reut_A1886
MMR (mismatch excision repair)
DNA ligase
Reut_A1886
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Reut_A1886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AAZ61251
UniProt:
Q470D2
LinkDB
All DBs
Position
1:complement(2065205..2067340)
Genome browser
AA seq
711 aa
AA seq
DB search
MNATHRGAQADASAPAGGLPPATAAERVQWLRDELDRHNYQYYVLDAPTIPDAEYDALFT
ELQALEAEHPELLTPDSPTQRVGGAPLSAFDTVRHRVPMLSLNNGFSDEDVTGFDRRCAQ
GLGRSAAAGGEQDLFSAAEGVEYACELKFDGLAMSLRYEDGRLVQAATRGDGETGEDVTV
NVRTIKAIPLKLRGAAPAVLEVRGEVFMYRRDFDKLNARQAEAGDKTFVNPRNAAAGSLR
QLDPRITAKRPLSFFAYGLGELQGIERPATHSAMLDGFATMGLPVCNERAVVKGAQGLLD
FYRKVGEKRDQLPYDIDGVVYKVNALAEQEQLGFVSRAPRFALAHKFPAQEMTTIVEDIE
VQVGRTGAITPVARLQPVFVGGVTVTNATLHNEDEVRRKDVHIGDTVIVRRAGDVIPEVV
AVVLERRPDDARAFVMPTACPVCGSHIERLEDEAIARCTGGLICAAQRKQALLHFAQRRA
MDIEGLGDKVVEQLVDQGIVRTPADLYKLGVAKLAALDRMADKSAGNLVAAIEASRSTTF
NRFIFSLGIRHVGEATAKDLARHFGKLDGLMVADEAALLEVNDVGPVVAQSIVNFFGEPH
NVEVIEQLRAAGVHWPESEPVARAPAPLAGKTFVLTGTLPSLSREAAKEMLEAAGAKVAG
SVSKKTDYVVAGAEAGSKLDKAEALGVPVLDEAGMLALLESVGAGQPGEQS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaacccatcgcggtgcgcaggccgatgcctccgcgccggctggcggcttgccg
cccgcaactgccgcggaacgcgtgcaatggctgcgcgacgagctggaccgccacaactac
cagtattacgtgctcgacgcaccgaccattccggatgccgagtacgacgcgctattcacc
gaactgcaggcactcgaagccgagcatcccgaactgctgacgcccgattcgccgacgcaa
cgcgtgggcggcgcgccgctgtcggcctttgatacggtacgccaccgcgtgccgatgctg
tcgctgaacaacggtttctccgacgaggacgtcaccggttttgaccgacgctgcgcgcaa
ggactcgggcgcagcgccgcagcaggcggcgagcaggacttgttcagcgccgcggaaggg
gtggaatacgcatgcgagctgaaattcgacggcctggccatgtcgctgcgctacgaagac
ggtcgcctggtgcaggcggccacgcgcggcgacggtgaaaccggtgaagacgtgaccgtc
aatgtgcgcaccatcaaggcgattccgctgaagctgcgcggcgcggcgcctgcggtgctc
gaggtgcgcggcgaagtcttcatgtaccgccgggatttcgacaagctcaatgcgcgccag
gccgaggccggcgataagacgttcgtcaatccgcgcaatgccgcggccggcagcctgcgg
cagctggatccgcgcattaccgcgaagcgtccgctttcgttcttcgcatatggcctcggt
gagttgcagggcatcgaacgtccggctactcacagcgcgatgctcgatggctttgcgacc
atgggcctgcccgtctgcaacgagcgcgcggtggtgaaaggcgcacaaggcctgctcgat
ttctaccgcaaggtgggcgagaagcgcgaccagttgccgtatgacatcgatggcgtggtc
tacaaggtcaacgcgctggccgagcaggaacagcttggcttcgtgtcgcgcgcgccgcgc
ttcgcgctcgcgcacaagttcccggcgcaggagatgaccaccatcgtcgaggacatcgaa
gtgcaggtcggccgcaccggtgccattacgcctgtcgcgcgcctgcagccggtgttcgtc
ggtggtgtgacggtgaccaatgccaccctgcacaacgaggacgaggtgcgccgcaaggac
gtgcatatcggcgacaccgtgatcgtacgccgcgccggcgatgtgattccggaggtcgtc
gccgtggtgctggagcgccgccccgacgatgcgcgcgcgttcgtgatgccgactgcctgc
ccggtatgcggctcgcacatcgagcgcctggaagacgaggccatcgcgcgctgcacgggc
ggcctgatctgtgcggcgcagcgcaagcaggcgctgctgcatttcgcgcagcgtcgcgcc
atggatatcgaaggccttggcgacaaggtcgtcgagcagctggtcgaccagggcatcgtg
cgcacgccggcggatctctacaaactgggtgtggccaagcttgccgcattggaccgcatg
gcggacaagtcggcgggcaacctcgtggctgccattgaagcctcgcgcagcaccacgttc
aaccggttcatcttctcgcttggaattcgacacgtgggcgaggctacggccaaggacctg
gcccgccatttcggcaagctcgacggactgatggtggccgacgaggccgcgctgcttgaa
gtcaacgacgtgggccctgtggtggcgcagtcgatcgtcaatttcttcggcgagccgcac
aacgtcgaggtcatcgagcagttgcgcgcggcaggcgtacactggccggaaagcgagccc
gtcgcgcgcgcgccggcaccactcgcgggcaagaccttcgtactgacaggcacgctgccg
agcctgtcgcgcgaggcagccaaggaaatgctggaggccgcgggcgccaaggtcgcaggc
tctgtatcgaagaagacagactacgtcgtggccggcgccgaggctggcagcaagctcgac
aaggccgaggcgctgggtgtaccggtgctcgacgaggcaggaatgctggcgctgctggaa
tcggtcggcgcgggccaaccgggggagcagtcatga
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