Rhynchophorus ferrugineus (red palm weevil): 143193113
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Entry
143193113 CDS
T11283
Symbol
Kdm2
Name
(RefSeq) lysine demethylase 2 isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
143193113 (Kdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfg03000
]
143193113 (Kdm2)
04121 Ubiquitin system [BR:
rfg04121
]
143193113 (Kdm2)
03036 Chromosome and associated proteins [BR:
rfg03036
]
143193113 (Kdm2)
Enzymes [BR:
rfg01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
143193113 (Kdm2)
Transcription factors [BR:
rfg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
143193113 (Kdm2)
Ubiquitin system [BR:
rfg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
143193113 (Kdm2)
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
143193113 (Kdm2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
143193113 (Kdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
LRR_4
JmjC
F-box
Cupin_8
JHD
RAD51D_N
ZinT
Motif
Other DBs
NCBI-GeneID:
143193113
NCBI-ProteinID:
XP_076255196
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MSQNSSAGKSKNSRQLVSIASLSTTLLKRERKQKKLYSEDWALGDDDEIEGRRTFSLQDK
LEDPAFEAHGMVKEMRGEELNVAYFQKYGFNTPLLFKEKTGLGLRVPPSNFSINDVRVSV
GSRRLLDVMDVSTQKNSEMTMKEWQKYYEDPNKTKLLNVISLEFSHTKLEYYVNSPTVVR
QIDWVDCVWPRHLKESQVEATNVLEEMKYPKVQKYCLMSVKGCYTDFHVDFGGTSVWYHI
LKGCKVFWLIPPTEHNIDLYERWCLSGKQSDIFFGDTVEKCGRIVLQAGNTFFIPTGWIH
AVYTPVDSLVFGGNFLHSFGIEKQLKIAQVEDNTKVPQKFRYPFFTEMLWYVLERYVHCL
LGNSHLSTGQDSPIPPERPHIHLTQAELHGLKEIVKYLHMLPSNKKNLPDLIRDPIALIQ
DVRTLIGLHRQDIRDLAITNRPVLSLPEDPDKKRQYNKAISNITKMPKPPSTFKGPKSSP
GSAPGDKGGPRRRRTRCKKCSACQRSDCGECTFCLDMVKFGGPGRAKQTCNMRQCLQPML
PVTAACARCGLDGWMQTPVAPLQKGPQRCDTASSLMECSVCYEIAHPPCIQRLCPDFTGY
INEDMPNSWECPMCCKLGKNTDYRPRHFRARQKSSDIRRISISSDASSAFENKIQPEHSD
SGSENDQKDSKDLLPIKKRRSSENSEVETKVAPPPSSDNNRKTAFRMQLAQQISSNTTKV
LKKPMVVVRPAPLMVINPLIPTNNLALDKRVILSIFKYLLPKDLLNCALVCKTWATYSID
PSLWKRMEFDHKKISSDMLKGTVRRQPEILSLNWCRINHFQLPWLIQRLNNLKQLYLQSI
DVKSAISLRTNHSAILQVLDLSYISDFNDSALREILGTNNDARSGLAGDKIRFRNLKSLK
LAGTDITDIAMRYVTQYLPNIQHLSLSMCPRISDAGIAQLTTKPANTVVNLISLDLSHAK
LVTEASLDHLSKCEKLTRLDCRQALNISTQALIKFAAKSKHDLQVREIKLVDIRQKPIQ
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaattcgtcagctggtaaaagtaaaaactctagacaattggtaagcattgct
tctttaagtacaactttattaaaacgggaacgtaaacagaaaaagctctactctgaagac
tgggcgttaggcgatgatgatgaaattgaaggtcggcgtacgttcagcttgcaggacaaa
ttggaggatcccgccttcgaagcacatggaatggttaaagagatgaggggcgaagaactg
aacgtggcgtattttcaaaaatacggcttcaacacaccacttcttttcaaagagaagact
ggactaggtttgagagttccaccgtcgaatttctcaattaatgatgtgagggtcagtgtt
ggttctagaaggcttctagacgtaatggatgttagcacccagaaaaatagcgagatgaca
atgaaggaatggcagaaatactacgaagatcctaacaagactaagttacttaatgtgatc
tccttggagttttctcatactaaattagaatattacgtaaacagccccactgtcgtaaga
caaattgactgggttgattgtgtttggcctcgtcacctcaaagaaagtcaagtagaagct
actaatgtgctggaagaaatgaaatatccaaaagtgcagaagtattgtcttatgtctgtc
aaaggttgttacaccgattttcatgtggatttcggtggtacctcagtatggtatcacata
ttaaaggggtgcaaggttttttggttgattccacctactgaacacaatattgatctttat
gaacgttggtgtctctcaggaaaacagtctgatatattttttggagacacagtagagaaa
tgtggcagaatagtactccaagccggtaataccttctttataccaactggttggatacac
gctgtttatacacctgtggattctcttgtgtttggtggtaatttcttacactcatttggt
attgaaaaacagttgaaaatcgctcaagtagaggataacacaaaagtaccacaaaaattc
agatatccattctttactgagatgttgtggtatgtactggaacgctatgtacattgcctt
ttgggaaattcccatttatcaactggacaagattcaccaatacctccagaacgaccacat
attcacttaacacaagccgaactacatggattaaaggaaatcgtaaaatatctccatatg
ttgccatcaaacaaaaagaatctccctgatcttataagagatcctattgctctcattcag
gacgttagaactttaattggtttacataggcaagacattagggatttggcgattactaat
agaccagtgctcagtttaccagaagatcctgataaaaaaagacaatataataaagcaatt
tctaatataactaaaatgccaaaacctccctctacatttaaaggtccaaaatcgtctccc
ggttcagcacctggagataaaggaggccctcggagacgacggacaagatgcaaaaaatgt
tcggcgtgccaaagatctgactgtggagagtgcacattctgtttggatatggttaaattt
gggggtcctggtagagccaaacaaacctgcaacatgcgacaatgtttacaaccaatgttg
cccgttacggcggcttgtgccagatgtggcttggatggttggatgcaaacgcctgtggcg
cctttacagaaaggtcctcaaagatgcgacactgccagttcccttatggagtgttctgta
tgttatgaaatagcgcaccctccttgtattcaacgtctttgtccagattttactggctat
ataaatgaagatatgcccaattcatgggaatgtccaatgtgttgcaaattgggcaaaaac
actgattaccggccaaggcattttcgagcgagacaaaaatcttcagatataaggagaatc
agtataagttcagatgcgtcaagtgcttttgaaaataaaatacaacctgaacattcagat
tcaggaagtgaaaatgaccaaaaagattctaaggatctactgcctataaagaaacgacga
tccagcgagaattcagaggttgaaacaaaagttgcgccacctccgtcatctgataataac
agaaagactgccttcaggatgcaactggcgcaacaaatttcttctaacacgacgaaagtt
ttaaagaaaccaatggtggttgtcaggccagcacctttaatggtgatcaatcctcttata
cccacaaataacttggcattagataaaagagttattttgtcaatatttaaatatttgtta
ccaaaagatttacttaattgcgcattagtatgtaaaacttgggctacttactccattgac
ccatctctttggaaacgtatggagtttgatcataaaaaaatatctagtgacatgctaaag
ggtactgttcgtcgtcaaccggaaattttgagtttgaattggtgtagaatcaaccatttt
caattaccctggcttatacaaaggttgaacaacttgaaacaactatacctgcagagtatt
gacgtcaaatcggctatatctttgaggaccaaccattctgctatattgcaggttctggat
ttgagttatatctccgatttcaatgattcggctttacgagaaatattaggtacaaataac
gacgctcggtcaggattggcgggagataaaattcgttttcgtaatttgaagtcactgaag
ttagctggaactgatattacagatattgctatgcgttatgtgacccaatatctaccaaat
atccaacacttgagtttaagtatgtgtcccagaatatcagacgcaggcattgctcaactg
acgacgaagcctgcaaatactgtcgttaatctcatcagtttggatctgagtcatgcaaaa
ttagtaacagaagcgagcttggatcatttatcaaaatgcgaaaaactaaccaggctagat
tgtaggcaagccttgaacatctccactcaagccttgatcaaatttgcggcaaaaagcaaa
cacgacttacaagtcagggagatcaaattggtagatattagacaaaaacctattcagtaa
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