Rhinolophus ferrumequinum (greater horseshoe bat): 117012830
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Entry
117012830 CDS
T07722
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04140
Autophagy - animal
rfq05014
Amyotrophic lateral sclerosis
rfq05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117012830 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117012830 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
117012830 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rfq04131
]
117012830 (SMCR8)
Membrane trafficking [BR:
rfq04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117012830 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
PsbQ
Motif
Other DBs
NCBI-GeneID:
117012830
NCBI-ProteinID:
XP_032945170
Ensembl:
ENSRFEG00010005696
UniProt:
A0A671E520
LinkDB
All DBs
Position
21:complement(561228..570563)
Genome browser
AA seq
937 aa
AA seq
DB search
MISAPDVVAFTKEDEYEEEPYNEPALPEEYSVPLFPFASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKSFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKLKGSDLSSGEMEHTQDQPDQAATTSNPDECADTDLYTCRP
AYTPKLIKAKSAKCFDKKLKTLEELCDTEYFTQTLAQLRHIEHTFRGDLCYLLTSQIDKA
LLKQQHITNFLFEDFVEVDERVVEKQASTPPPSSQDRPPSRSLGECPIPQVLISVGSYKS
SVESVLIKMEQELGEEEYREVEGTGLSSFDPQENLDYLDMDMKGSVSSGESIEVLGTEKP
TCVLATSDSQASLTVSLSPQVVRSKAVSHRTVSEDSIEVLSTCPSEALIPEDFKASYPSA
INEEESYADDSEGAIHFQVGVSLPELGEAEEGSLENATSQTDSCCIGKESDSLQGPLSTP
VPTLSDKNGVVSTPPQRYRQTDQGFHVDFTVENASPSSRDNSSEGCPAYELDPSHLLASR
DVSKTSLDNYSDTTSYVSSVASSSWDRTPSCAHPAGPSSERHKKRAGQNALKFIRQYPFA
HPAIYSLLSGRTLVVLGEDEAIVRKLVTALSIFIPNYSRYAKPVKHWVSSPLHIMDFQKW
KLIGLQRLASPASAGTLHALSRYSRYASVLDLDNKTLRCPLYRGTLVPRLADHRTQIKRG
STYYLHVQSMLAQLCSKAFLYTFCHHLHLPAHDKDTQELLASRQASFLKLNLGLVNEDVK
VVQYLAELLKLHYMQESPGTSHPMLRFDYVPSFLYKI
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccaaagaggacgagtacgaggaggagccc
tacaatgagccggccctgcccgaggagtactcggtgccgctcttccccttcgcgagccaa
ggagctaacccatggtccaaactgtccggagccaagttctctcgggacttcatccttatt
tccgagttttcggagcaggtgggaccccagcccttgctgaccatccccaatgacaccaaa
gttttcggtacttttgatcttaattacttctccttgcggatcatgtctgtggattaccag
gcttcctttgtgggccatccccctggttctgcctaccccaagctgaacttcgtggaggac
tccaaggtggttctgggagactccaaggagggagcctttgcatatgtgcaccaccttacc
ctgtacgacctggaggcccgtggcttcgtgaggcccttttgcatggcttatatctccgca
gaccagcacaaaatcatgcagcagtttcaggagctttcagctgaattttccaaagcttct
gagtgcttgaagacaggcaacaggaagtcctttgctggggaacttgaaaaaaaactaaaa
gacttggattataccaggacagtgctgcatactgagacggagatccagaagaaagccaac
gacaaaggtttttactcatctcaggcaattgagaaagccaatgaactggctagtgtagag
aaatccatcattgaacaccaagacctgctgaagcagatccgctcgtaccctcatcggaag
ttgaaggggtctgatttgtcttctggggagatggagcatacccaggatcagcctgaccag
gcagccactacctctaatcctgacgagtgtgctgacacagacctatacacctgcagaccc
gcctacaccccaaaactcatcaaagcaaagtccgccaagtgttttgacaagaagttgaag
accttggaagagctctgtgacactgagtatttcacccagaccctggctcagctcagacac
attgagcacacattcagaggagacctgtgctatctcctgaccagccagattgacaaagcg
ttactaaagcaacagcacataacaaatttcctctttgaagactttgtggaggtcgatgag
agggtggtagagaaacaagcaagcacaccccctccgtccagtcaagacaggccgccttcc
aggtccctaggagaatgtccaattcctcaagtgttaattagcgttggctcctacaagtcc
agcgtggagtctgtgctcatcaagatggagcaggaacttggagaggaggagtacagggaa
gtggaggggacaggactgagcagctttgacccccaggaaaacttggactacctggatatg
gacatgaaagggagcgtcagcagtggggaaagcatcgaggttctaggcacggagaagccc
acctgtgtgctggccacatctgacagccaggccagcctcacggtgtcactgagcccccag
gtggtccggagcaaagcggtcagccacaggactgtcagtgaggacagcatcgaggtcctc
agcacctgcccttccgaggccctcatccctgaggacttcaaggccagctacccaagtgcc
attaacgaagaagagtcatatgcagacgacagtgagggagccatccacttccaggtaggc
gtcagcctgccggagctgggggaagccgaggaagggagcctagaaaacgccacctcacag
acagactcctgctgcatcgggaaggagagcgacagtctgcaggggccgctgtccactcca
gtccccacactatctgacaagaatggagtagtgagcacccccccgcagcgctacaggcag
acggaccagggcttccatgtggacttcacggtggaaaacgccagcccttcttcccgagac
aacagttccgaaggctgccctgcctatgagctggacccgagtcacctgctggctagccgg
gacgtcagtaagaccagcctggacaactactcagacaccaccagctacgtgagcagtgtc
gcctccagcagctgggacaggaccccctcctgtgctcatcccgccggcccctcttctgag
aggcataaaaagagggctggccagaatgccttaaaattcatccgccagtatccctttgcc
cacccagccatctactccctgctcagcggaaggacactcgtggtcctgggggaggacgag
gccatagtcaggaagcttgtgacagcgttgtccatcttcatccccaactacagccgctat
gccaaacctgtgaagcactgggtttcctcccctttgcacattatggattttcaaaagtgg
aagcttattggcctgcagagattggcgtcccctgccagtgctggcactctccacgcgctg
agccgctacagccgctacgcgagcgtcctggacctggacaacaagacactgcgctgccct
ctgtacaggggcacccttgtgcctcggctggcagaccaccgtacgcagatcaagcggggc
agcacctactacctgcacgtccagagcatgctcgcccagctctgctccaaggccttcctc
tacaccttctgccaccacctgcacctgccagcccacgacaaggacacacaggagctgctg
gccagccggcaggcgagcttcttgaagctgaatctcggtctcgtgaatgaagacgtgaag
gtggtccagtacctggctgagctgctgaagctgcactatatgcaggagtctcctgggacc
agccaccccatgctcaggtttgactatgtccccagttttctgtacaaaatctga
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